Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC11.25□□□□□ -0.61
NDUFA1O15239 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11.25□□□□□ -0.61
NDUFA1O15239 POU5F1P6-201ENST00000466990 990 ntBASIC11.25□□□□□ -0.61
NDUFA1O15239 FAM86EP-206ENST00000510506 987 ntBASIC11.25□□□□□ -0.61
NDUFA1O15239 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC11.25□□□□□ -0.61
NDUFA1O15239 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.25□□□□□ -0.61
NDUFA1O15239 TPSP2-201ENST00000561760 610 ntBASIC11.25□□□□□ -0.61
NDUFA1O15239 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.25□□□□□ -0.61
NDUFA1O15239 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
NDUFA1O15239 AP002414.4-201ENST00000589764 1148 ntBASIC11.25□□□□□ -0.61
NDUFA1O15239 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.25□□□□□ -0.61
NDUFA1O15239 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NDUFA1O15239 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NDUFA1O15239 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NDUFA1O15239 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NDUFA1O15239 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC11.25□□□□□ -0.61
NDUFA1O15239 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.25□□□□□ -0.61
NDUFA1O15239 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
NDUFA1O15239 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NDUFA1O15239 IER3-202ENST00000376377 1350 ntBASIC11.25□□□□□ -0.61
NDUFA1O15239 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NDUFA1O15239 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NDUFA1O15239 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NDUFA1O15239 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NDUFA1O15239 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC11.25□□□□□ -0.61
NDUFA1O15239 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
NDUFA1O15239 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NDUFA1O15239 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NDUFA1O15239 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.25□□□□□ -0.61
NDUFA1O15239 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
NDUFA1O15239 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
NDUFA1O15239 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.25□□□□□ -0.61
NDUFA1O15239 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC11.25□□□□□ -0.61
NDUFA1O15239 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
NDUFA1O15239 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.24□□□□□ -0.61
NDUFA1O15239 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC11.24□□□□□ -0.61
NDUFA1O15239 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC11.24□□□□□ -0.61
NDUFA1O15239 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC11.24□□□□□ -0.61
NDUFA1O15239 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
NDUFA1O15239 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC11.24□□□□□ -0.61
NDUFA1O15239 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC11.24□□□□□ -0.61
NDUFA1O15239 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
NDUFA1O15239 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC11.24□□□□□ -0.61
NDUFA1O15239 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.24□□□□□ -0.61
NDUFA1O15239 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
NDUFA1O15239 PCED1CP-201ENST00000419887 785 ntBASIC11.24□□□□□ -0.61
NDUFA1O15239 KRT18P21-201ENST00000515767 1272 ntBASIC11.24□□□□□ -0.61
NDUFA1O15239 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC11.24□□□□□ -0.61
NDUFA1O15239 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
NDUFA1O15239 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
NDUFA1O15239 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC11.24□□□□□ -0.61
NDUFA1O15239 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.24□□□□□ -0.61
NDUFA1O15239 BNIP3P18-201ENST00000593976 575 ntBASIC11.24□□□□□ -0.61
NDUFA1O15239 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.24□□□□□ -0.61
NDUFA1O15239 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.24□□□□□ -0.61
NDUFA1O15239 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11.24□□□□□ -0.61
NDUFA1O15239 AC116407.4-201ENST00000623319 1061 ntBASIC11.24□□□□□ -0.61
NDUFA1O15239 AL590326.2-201ENST00000625139 305 ntBASIC11.24□□□□□ -0.61
NDUFA1O15239 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.24□□□□□ -0.61
NDUFA1O15239 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
NDUFA1O15239 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.24□□□□□ -0.61
NDUFA1O15239 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.24□□□□□ -0.61
NDUFA1O15239 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11.24□□□□□ -0.61
NDUFA1O15239 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.24□□□□□ -0.61
NDUFA1O15239 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
NDUFA1O15239 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
NDUFA1O15239 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
NDUFA1O15239 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.24□□□□□ -0.61
NDUFA1O15239 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC11.24□□□□□ -0.61
NDUFA1O15239 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.24□□□□□ -0.61
NDUFA1O15239 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
NDUFA1O15239 C1R-202ENST00000536053 2347 ntTSL 2 BASIC11.24□□□□□ -0.61
NDUFA1O15239 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
NDUFA1O15239 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms