Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC018845.2-201ENST00000568326 409 ntBASIC15.52■□□□□ 0.08
UPK1AO00322 AC023141.13-201ENST00000604991 943 ntBASIC15.52■□□□□ 0.08
UPK1AO00322 AL031055.1-201ENST00000606362 631 ntBASIC15.52■□□□□ 0.08
UPK1AO00322 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.52■□□□□ 0.08
UPK1AO00322 AC120114.3-201ENST00000611923 658 ntBASIC15.52■□□□□ 0.08
UPK1AO00322 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.52■□□□□ 0.08
UPK1AO00322 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
UPK1AO00322 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.52■□□□□ 0.08
UPK1AO00322 AC007064.4-201ENST00000637740 555 ntBASIC15.52■□□□□ 0.08
UPK1AO00322 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1AO00322 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
UPK1AO00322 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
UPK1AO00322 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
UPK1AO00322 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
UPK1AO00322 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1AO00322 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1AO00322 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.52■□□□□ 0.07
UPK1AO00322 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1AO00322 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1AO00322 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
UPK1AO00322 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1AO00322 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1AO00322 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1AO00322 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1AO00322 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.51■□□□□ 0.07
UPK1AO00322 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.51■□□□□ 0.07
UPK1AO00322 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.51■□□□□ 0.07
UPK1AO00322 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 AC106730.1-201ENST00000566722 1090 ntBASIC15.51■□□□□ 0.07
UPK1AO00322 MIR3909-201ENST00000579518 119 ntBASIC15.51■□□□□ 0.07
UPK1AO00322 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
UPK1AO00322 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.51■□□□□ 0.07
UPK1AO00322 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.51■□□□□ 0.07
UPK1AO00322 AC004877.2-201ENST00000623941 599 ntBASIC15.51■□□□□ 0.07
UPK1AO00322 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.51■□□□□ 0.07
UPK1AO00322 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.51■□□□□ 0.07
UPK1AO00322 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1AO00322 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
UPK1AO00322 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
UPK1AO00322 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.5■□□□□ 0.07
UPK1AO00322 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1AO00322 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1AO00322 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
UPK1AO00322 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1AO00322 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.5■□□□□ 0.07
UPK1AO00322 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1AO00322 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.5■□□□□ 0.07
UPK1AO00322 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1AO00322 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
UPK1AO00322 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.5■□□□□ 0.07
UPK1AO00322 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1AO00322 PMS2P4-201ENST00000412466 1052 ntBASIC15.5■□□□□ 0.07
UPK1AO00322 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.5■□□□□ 0.07
UPK1AO00322 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.5■□□□□ 0.07
UPK1AO00322 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.5■□□□□ 0.07
UPK1AO00322 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.5■□□□□ 0.07
UPK1AO00322 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.5■□□□□ 0.07
UPK1AO00322 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.5■□□□□ 0.07
UPK1AO00322 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
UPK1AO00322 AC021097.1-201ENST00000607902 574 ntBASIC15.5■□□□□ 0.07
UPK1AO00322 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.5■□□□□ 0.07
UPK1AO00322 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.5■□□□□ 0.07
UPK1AO00322 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.5■□□□□ 0.07
UPK1AO00322 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.5■□□□□ 0.07
UPK1AO00322 LINC01144-201ENST00000626198 1710 ntBASIC15.5■□□□□ 0.07
UPK1AO00322 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1AO00322 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1AO00322 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.5■□□□□ 0.07
UPK1AO00322 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.5■□□□□ 0.07
UPK1AO00322 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.5■□□□□ 0.07
UPK1AO00322 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.5■□□□□ 0.07
UPK1AO00322 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
UPK1AO00322 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1AO00322 AC025580.3-201ENST00000617932 1424 ntBASIC15.5■□□□□ 0.07
UPK1AO00322 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms