Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.32■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AC009477.1-201ENST00000452936 217 ntBASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.31■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 MIR661-201ENST00000384842 89 ntBASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SERBP1P5-201ENST00000510079 1181 ntBASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AL844908.2-201ENST00000609461 460 ntBASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.3■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AC106886.4-201ENST00000623557 2502 ntBASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms