Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 AL138828.2-201ENST00000615812 383 ntBASIC18.8■□□□□ 0.6
PALM3A6NDB9 SPDYE12P-201ENST00000618416 771 ntBASIC18.8■□□□□ 0.6
PALM3A6NDB9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 AL136982.4-201ENST00000437689 1740 ntBASIC18.8■□□□□ 0.6
PALM3A6NDB9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.79■□□□□ 0.6
PALM3A6NDB9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PALM3A6NDB9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PALM3A6NDB9 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.79■□□□□ 0.6
PALM3A6NDB9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PALM3A6NDB9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PALM3A6NDB9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.79■□□□□ 0.6
PALM3A6NDB9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.79■□□□□ 0.6
PALM3A6NDB9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PALM3A6NDB9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PALM3A6NDB9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.79■□□□□ 0.6
PALM3A6NDB9 MIR770-201ENST00000390219 98 ntBASIC18.79■□□□□ 0.6
PALM3A6NDB9 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PALM3A6NDB9 MTND6P24-201ENST00000440466 518 ntBASIC18.79■□□□□ 0.6
PALM3A6NDB9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.79■□□□□ 0.6
PALM3A6NDB9 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PALM3A6NDB9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.79■□□□□ 0.6
PALM3A6NDB9 AC073592.8-201ENST00000624126 511 ntBASIC18.79■□□□□ 0.6
PALM3A6NDB9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PALM3A6NDB9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PALM3A6NDB9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.79■□□□□ 0.6
PALM3A6NDB9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
PALM3A6NDB9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
PALM3A6NDB9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PALM3A6NDB9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PALM3A6NDB9 AC099398.1-201ENST00000567919 2776 ntBASIC18.79■□□□□ 0.6
PALM3A6NDB9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.79■□□□□ 0.6
PALM3A6NDB9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PALM3A6NDB9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PALM3A6NDB9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PALM3A6NDB9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.78■□□□□ 0.6
PALM3A6NDB9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.78■□□□□ 0.6
PALM3A6NDB9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PALM3A6NDB9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PALM3A6NDB9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PALM3A6NDB9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PALM3A6NDB9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PALM3A6NDB9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PALM3A6NDB9 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PALM3A6NDB9 SPDYE17-201ENST00000412399 783 ntBASIC18.78■□□□□ 0.6
PALM3A6NDB9 RPL37AP1-201ENST00000412502 279 ntBASIC18.78■□□□□ 0.6
PALM3A6NDB9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PALM3A6NDB9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PALM3A6NDB9 AL139010.1-201ENST00000454878 894 ntBASIC18.78■□□□□ 0.6
PALM3A6NDB9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.78■□□□□ 0.6
PALM3A6NDB9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.78■□□□□ 0.6
PALM3A6NDB9 AL079307.3-201ENST00000556114 283 ntBASIC18.78■□□□□ 0.6
PALM3A6NDB9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.78■□□□□ 0.6
PALM3A6NDB9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.78■□□□□ 0.6
PALM3A6NDB9 AC026979.3-201ENST00000607315 403 ntBASIC18.78■□□□□ 0.6
PALM3A6NDB9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PALM3A6NDB9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
PALM3A6NDB9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PALM3A6NDB9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PALM3A6NDB9 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PALM3A6NDB9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PALM3A6NDB9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PALM3A6NDB9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.78■□□□□ 0.6
PALM3A6NDB9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PALM3A6NDB9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.78■□□□□ 0.6
PALM3A6NDB9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PALM3A6NDB9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
PALM3A6NDB9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.78■□□□□ 0.6
PALM3A6NDB9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PALM3A6NDB9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.77■□□□□ 0.6
PALM3A6NDB9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PALM3A6NDB9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.77■□□□□ 0.6
PALM3A6NDB9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PALM3A6NDB9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PALM3A6NDB9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
PALM3A6NDB9 AL691432.1-201ENST00000596308 1422 ntBASIC18.77■□□□□ 0.6
PALM3A6NDB9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PALM3A6NDB9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PALM3A6NDB9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PALM3A6NDB9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.77■□□□□ 0.6
PALM3A6NDB9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PALM3A6NDB9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PALM3A6NDB9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.77■□□□□ 0.6
PALM3A6NDB9 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms