Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 MIR6752-201ENST00000618442 71 ntBASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 BNIP3P1-202ENST00000550043 1585 ntBASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC144AA2RUR9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC144AA2RUR9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 ZBTB45P2-201ENST00000452245 1531 ntBASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 AC098850.1-201ENST00000419919 790 ntBASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 U91328.1-201ENST00000437528 223 ntBASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 INE1-201ENST00000456273 945 ntBASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 ELK1P1-201ENST00000485699 580 ntBASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 AC123567.1-201ENST00000548294 1261 ntBASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 AC093726.1-201ENST00000608064 963 ntBASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 AP001282.1-201ENST00000531301 1499 ntBASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC144AA2RUR9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 AC074338.1-201ENST00000416825 156 ntBASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 RPL13P2-201ENST00000440687 659 ntBASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 AL158212.4-201ENST00000624062 1286 ntBASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
CCDC144AA2RUR9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
CCDC144AA2RUR9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.31
CCDC144AA2RUR9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC144AA2RUR9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC144AA2RUR9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CCDC144AA2RUR9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC144AA2RUR9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CCDC144AA2RUR9 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC23.2■■□□□ 1.3
CCDC144AA2RUR9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms