Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC006277.1-201ENST00000624348 1610 ntBASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AL596257.1-201ENST00000641463 2694 ntBASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC005412.3-201ENST00000580309 715 ntBASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC092919.2-201ENST00000623631 1645 ntBASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TCRBV4S1A1TA0A5B7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.18□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC004449.1-201ENST00000564240 433 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms