Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 AL359258.3-201ENST00000622910 2331 ntBASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 AC005521.1-201ENST00000393351 872 ntBASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 KRT17P6-201ENST00000453795 1220 ntBASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 AC063952.2-201ENST00000498792 1227 ntBASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 AL136038.3-201ENST00000561909 1096 ntBASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 LINC00528-201ENST00000600723 2160 ntBASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 GRK6P1-201ENST00000400595 1711 ntBASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 AC011477.6-201ENST00000604980 1927 ntBASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 AL390755.1-201ENST00000623716 2027 ntBASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 AC013726.1-201ENST00000563747 2285 ntBASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 HAUS4P1-201ENST00000406739 1145 ntBASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 IGHV3-47-201ENST00000425060 335 ntBASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 SLC25A6P2-201ENST00000497974 877 ntBASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 AC107918.2-201ENST00000530817 355 ntBASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TCRBV3S1A0A5B6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms