Protein–RNA interactions for Protein: A0A0J9YWF9

TRBV2, T-cell receptor beta variable 2 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV2A0A0J9YWF9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
TRBV2A0A0J9YWF9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 AC013268.4-201ENST00000637413 2228 ntBASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 AL356309.3-201ENST00000624132 1934 ntBASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 AC087641.1-201ENST00000557561 1021 ntBASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 AC139887.3-201ENST00000568585 713 ntBASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 AC138894.3-201ENST00000603787 634 ntBASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 AP003680.1-201ENST00000598970 3660 ntBASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV2A0A0J9YWF9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV2A0A0J9YWF9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV2A0A0J9YWF9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV2A0A0J9YWF9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms