Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 AC138894.3-201ENST00000603787 634 ntBASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV5A0A0B4J249 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 TNRC18P2-201ENST00000417666 2714 ntBASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 SLC25A6P2-201ENST00000497974 877 ntBASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 AC091167.2-201ENST00000579581 588 ntBASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 AL589182.2-201ENST00000619332 1049 ntBASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV5A0A0B4J249 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms