Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 TUBB3P1-201ENST00000405796 1332 ntBASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 COX20P2-201ENST00000452636 358 ntBASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 DUX4L27-201ENST00000554796 1261 ntBASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 OR6D1P-203ENST00000641209 4860 ntBASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGA6Q9Y5G7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 LINC00554-201ENST00000564841 3011 ntBASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 WASH6P-202ENST00000359512 1437 ntBASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 AC092364.2-201ENST00000596710 2692 ntBASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 PMS2P4-201ENST00000412466 1052 ntBASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 RBPMS2P1-201ENST00000437762 623 ntBASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 MIR4745-201ENST00000577608 62 ntBASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA6Q9Y5G7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 SPDYE7P-202ENST00000420373 878 ntBASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 AC055876.3-201ENST00000431496 288 ntBASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 KLF2P3-201ENST00000451977 1087 ntBASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 AC138649.4-201ENST00000612222 287 ntBASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA6Q9Y5G7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms