Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 CICP13-201ENST00000422015 2789 ntBASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 AC136621.1-201ENST00000624017 2304 ntBASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 LINC00982-205ENST00000420957 435 ntBASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 AL020989.1-201ENST00000422979 469 ntBASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RCL1Q9Y2P8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 AC006486.2-201ENST00000624246 2199 ntBASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 AC117947.1-201ENST00000427448 529 ntBASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 TSPY22P-201ENST00000427496 604 ntBASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 AC246785.2-201ENST00000432512 513 ntBASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 HOMER2P1-201ENST00000455653 964 ntBASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 IGHV3-41-201ENST00000613121 348 ntBASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 TMEM191A-211ENST00000637163 1067 ntBASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 TOP3BP1-201ENST00000420768 1380 ntBASIC13.44□□□□□ -0.26
RCL1Q9Y2P8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms