Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 MGST3-203ENST00000367885 680 ntTSL 2 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 HAUS4P1-201ENST00000406739 1145 ntBASIC23.29■■□□□ 1.32
STAG3Q9UJ98 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 FXR1-221ENST00000491674 365 ntTSL 2 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
STAG3Q9UJ98 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 CD74-212ENST00000524315 584 ntTSL 5 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 MIR5189-201ENST00000577370 114 ntBASIC23.28■■□□□ 1.32
STAG3Q9UJ98 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 LINC01115-203ENST00000606068 577 ntBASIC23.28■■□□□ 1.32
STAG3Q9UJ98 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 TUBB1P2-201ENST00000422712 1306 ntBASIC23.28■■□□□ 1.32
STAG3Q9UJ98 TUBB1P1-201ENST00000503144 1300 ntBASIC23.28■■□□□ 1.32
STAG3Q9UJ98 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC23.28■■□□□ 1.32
STAG3Q9UJ98 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 AC092933.1-201ENST00000393644 945 ntBASIC23.27■■□□□ 1.32
STAG3Q9UJ98 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 AL442647.2-201ENST00000429864 857 ntBASIC23.27■■□□□ 1.32
STAG3Q9UJ98 ACTG1P3-201ENST00000431775 1114 ntBASIC23.27■■□□□ 1.32
STAG3Q9UJ98 BCRP2-202ENST00000447763 634 ntBASIC23.27■■□□□ 1.32
STAG3Q9UJ98 BCRP6-201ENST00000510112 632 ntBASIC23.27■■□□□ 1.32
STAG3Q9UJ98 BCRP7-201ENST00000511549 544 ntBASIC23.27■■□□□ 1.32
STAG3Q9UJ98 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC23.27■■□□□ 1.32
STAG3Q9UJ98 AC020907.1-201ENST00000616460 1350 ntBASIC23.27■■□□□ 1.31
STAG3Q9UJ98 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC23.26■■□□□ 1.31
STAG3Q9UJ98 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
STAG3Q9UJ98 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
STAG3Q9UJ98 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms