Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 GAPDHP21-201ENST00000450301 1010 ntBASIC19.56■□□□□ 0.72
SALL1Q9NSC2 AC245100.5-201ENST00000452108 331 ntBASIC19.56■□□□□ 0.72
SALL1Q9NSC2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 AC027307.3-201ENST00000594262 1100 ntBASIC19.56■□□□□ 0.72
SALL1Q9NSC2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 ME2P1-201ENST00000426028 1970 ntBASIC19.56■□□□□ 0.72
SALL1Q9NSC2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 AC104794.3-201ENST00000566840 1248 ntBASIC19.55■□□□□ 0.72
SALL1Q9NSC2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 AL035252.4-201ENST00000624174 288 ntBASIC19.55■□□□□ 0.72
SALL1Q9NSC2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 AL358472.5-202ENST00000641448 1267 ntBASIC19.55■□□□□ 0.72
SALL1Q9NSC2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 CYP4F24P-201ENST00000586049 1580 ntBASIC19.55■□□□□ 0.72
SALL1Q9NSC2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SALL1Q9NSC2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 AL136982.4-201ENST00000437689 1740 ntBASIC19.54■□□□□ 0.72
SALL1Q9NSC2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 AC005034.1-201ENST00000426657 489 ntBASIC19.54■□□□□ 0.72
SALL1Q9NSC2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 API5-211ENST00000534695 560 ntTSL 5 BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 AL132655.2-201ENST00000596276 594 ntBASIC19.54■□□□□ 0.72
SALL1Q9NSC2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 AC063926.2-201ENST00000623766 1308 ntBASIC19.54■□□□□ 0.72
SALL1Q9NSC2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SALL1Q9NSC2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms