Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 AC010536.1-201ENST00000538868 2611 ntBASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDC42SE1Q9NRR8 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
CDC42SE1Q9NRR8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC8.27□□□□□ -1.08
CDC42SE1Q9NRR8 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.08
CDC42SE1Q9NRR8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
CDC42SE1Q9NRR8 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
CDC42SE1Q9NRR8 SLC22A20-204ENST00000530038 1673 ntBASIC8.27□□□□□ -1.08
CDC42SE1Q9NRR8 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
CDC42SE1Q9NRR8 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
CDC42SE1Q9NRR8 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
CDC42SE1Q9NRR8 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 AC007322.3-201ENST00000426526 701 ntBASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 AC015818.8-201ENST00000587907 1519 ntBASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
CDC42SE1Q9NRR8 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms