Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 AC009947.1-201ENST00000444350 727 ntBASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 AC091167.2-201ENST00000579581 588 ntBASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 AL365203.3-201ENST00000609742 2057 ntBASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 AC129492.6-201ENST00000611383 1305 ntBASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.3■□□□□ 0.04
CTPS2Q9NRF8 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 AL596257.1-201ENST00000641463 2694 ntBASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 AC026396.1-201ENST00000419388 421 ntBASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 AC010654.1-201ENST00000615722 808 ntBASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 AC006449.6-201ENST00000612330 2296 ntBASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 PCGF3-213ENST00000620529 1899 ntBASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 GPAA1P2-202ENST00000606848 1787 ntBASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.29■□□□□ 0.04
CTPS2Q9NRF8 AC022188.1-201ENST00000620960 1664 ntBASIC15.28■□□□□ 0.04
CTPS2Q9NRF8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.28■□□□□ 0.04
CTPS2Q9NRF8 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms