Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
NECTIN3Q9NQS3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NECTIN3Q9NQS3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NECTIN3Q9NQS3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NECTIN3Q9NQS3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.75■□□□□ 0.11
NECTIN3Q9NQS3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NECTIN3Q9NQS3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NECTIN3Q9NQS3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NECTIN3Q9NQS3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 AC013467.2-201ENST00000605472 835 ntBASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 C20orf181-201ENST00000623918 480 ntBASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 AP001350.2-201ENST00000625104 1094 ntBASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 LINC00895-201ENST00000629028 1637 ntBASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NECTIN3Q9NQS3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 AC092384.3-202ENST00000564646 2873 ntBASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 FAM58CP-201ENST00000435741 640 ntBASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 AC140658.5-201ENST00000438532 169 ntBASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 AL136379.1-201ENST00000623471 2642 ntBASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NECTIN3Q9NQS3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms