Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.32■□□□□ 0.36
CYLDQ9NQC7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
CYLDQ9NQC7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYLDQ9NQC7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYLDQ9NQC7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 AC005622.1-201ENST00000636801 1703 ntBASIC17.31■□□□□ 0.36
CYLDQ9NQC7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 AL645939.2-201ENST00000427340 991 ntBASIC17.31■□□□□ 0.36
CYLDQ9NQC7 GPS2P2-201ENST00000430745 888 ntBASIC17.31■□□□□ 0.36
CYLDQ9NQC7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 AC109322.1-201ENST00000524499 1264 ntBASIC17.31■□□□□ 0.36
CYLDQ9NQC7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 AP000842.3-202ENST00000569238 1080 ntBASIC17.31■□□□□ 0.36
CYLDQ9NQC7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 AC093028.1-201ENST00000622998 982 ntBASIC17.31■□□□□ 0.36
CYLDQ9NQC7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 AC008741.2-201ENST00000612792 3115 ntBASIC17.31■□□□□ 0.36
CYLDQ9NQC7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 AL592424.1-201ENST00000563624 1536 ntBASIC17.31■□□□□ 0.36
CYLDQ9NQC7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CYLDQ9NQC7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 AC007950.2-201ENST00000615045 2347 ntBASIC17.3■□□□□ 0.36
CYLDQ9NQC7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 AC015911.4-201ENST00000588022 1070 ntBASIC17.3■□□□□ 0.36
CYLDQ9NQC7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 FER1L4-210ENST00000615531 5998 ntBASIC17.3■□□□□ 0.36
CYLDQ9NQC7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYLDQ9NQC7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYLDQ9NQC7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms