Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 AL009183.1-201ENST00000603760 355 ntBASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 PRAL-201ENST00000624952 3286 ntBASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 IGLL3P-201ENST00000412472 434 ntBASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 KRT18P34-201ENST00000488218 1270 ntBASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM38AQ9H6F2 AC011477.6-201ENST00000604980 1927 ntBASIC15.21■□□□□ 0.02
TMEM38AQ9H6F2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM38AQ9H6F2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TMEM38AQ9H6F2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM38AQ9H6F2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.21■□□□□ 0.02
TMEM38AQ9H6F2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM38AQ9H6F2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM38AQ9H6F2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEM38AQ9H6F2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM38AQ9H6F2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TMEM38AQ9H6F2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TMEM38AQ9H6F2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM38AQ9H6F2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM38AQ9H6F2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM38AQ9H6F2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM38AQ9H6F2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM38AQ9H6F2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM38AQ9H6F2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms