Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 MED15P5-201ENST00000423150 992 ntBASIC15.11■□□□□ 0.01
TRIM2Q9C040 AL591424.1-201ENST00000442569 1213 ntBASIC15.11■□□□□ 0.01
TRIM2Q9C040 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
TRIM2Q9C040 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM2Q9C040 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRIM2Q9C040 REXO1L8P-201ENST00000604378 1897 ntBASIC15.1■□□□□ 0.01
TRIM2Q9C040 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM2Q9C040 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
TRIM2Q9C040 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM2Q9C040 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TRIM2Q9C040 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.1■□□□□ 0.01
TRIM2Q9C040 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.1■□□□□ 0.01
TRIM2Q9C040 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM2Q9C040 AC140113.2-201ENST00000604370 208 ntBASIC15.1■□□□□ 0.01
TRIM2Q9C040 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM2Q9C040 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM2Q9C040 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRIM2Q9C040 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM2Q9C040 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM2Q9C040 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM2Q9C040 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM2Q9C040 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM2Q9C040 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM2Q9C040 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM2Q9C040 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM2Q9C040 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
TRIM2Q9C040 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM2Q9C040 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM2Q9C040 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM2Q9C040 BX842568.4-201ENST00000421222 227 ntBASIC15.09■□□□□ 0.01
TRIM2Q9C040 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.09■□□□□ 0.01
TRIM2Q9C040 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.09■□□□□ 0.01
TRIM2Q9C040 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRIM2Q9C040 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRIM2Q9C040 PGAM5P1-201ENST00000518923 814 ntBASIC15.09■□□□□ 0.01
TRIM2Q9C040 AC092865.5-201ENST00000545435 363 ntBASIC15.09■□□□□ 0.01
TRIM2Q9C040 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM2Q9C040 AC096734.2-201ENST00000562054 433 ntBASIC15.09■□□□□ 0.01
TRIM2Q9C040 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.09■□□□□ 0.01
TRIM2Q9C040 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms