Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNTNAP3Q9BZ76 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNTNAP3Q9BZ76 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CNTNAP3Q9BZ76 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNTNAP3Q9BZ76 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CNTNAP3Q9BZ76 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.57■□□□□ 0.08
CNTNAP3Q9BZ76 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNTNAP3Q9BZ76 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CNTNAP3Q9BZ76 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 FAM86HP-204ENST00000513466 959 ntBASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 RRP7BP-205ENST00000566851 833 ntBASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 MIR5189-201ENST00000577370 114 ntBASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNTNAP3Q9BZ76 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 AC126763.1-201ENST00000552015 2118 ntBASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 AL135999.2-201ENST00000622438 1686 ntBASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 FLJ13224-201ENST00000313737 1514 ntBASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 FTLP1-201ENST00000449155 526 ntBASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 DUTP2-201ENST00000519164 463 ntBASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNTNAP3Q9BZ76 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 FOXO1B-201ENST00000504678 1527 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms