Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 AL158211.3-201ENST00000607385 239 ntBASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 RN7SL828P-201ENST00000607615 303 ntBASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 AL589739.1-201ENST00000607720 493 ntBASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 TEX28P1-201ENST00000613479 1221 ntBASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 TEX28P2-201ENST00000617764 1221 ntBASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 AC006538.1-201ENST00000567905 1585 ntBASIC5.55□□□□□ -1.52
KRTAP4-3Q9BYR4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 AL589702.1-201ENST00000641229 1509 ntBASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 AC018695.7-201ENST00000624587 2492 ntBASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 PCGF3-213ENST00000620529 1899 ntBASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 GGT3P-204ENST00000453783 1664 ntBASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 HLA-H-201ENST00000383620 1096 ntBASIC5.54□□□□□ -1.52
KRTAP4-3Q9BYR4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms