Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 AC139887.3-201ENST00000568585 713 ntBASIC14.1□□□□□ -0.15
NICN1Q9BSH3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.1□□□□□ -0.15
NICN1Q9BSH3 MTDHP3-201ENST00000594186 672 ntBASIC14.1□□□□□ -0.15
NICN1Q9BSH3 AC010654.1-201ENST00000615722 808 ntBASIC14.1□□□□□ -0.15
NICN1Q9BSH3 AC004706.3-202ENST00000621574 984 ntBASIC14.1□□□□□ -0.15
NICN1Q9BSH3 AL358472.4-201ENST00000633140 710 ntBASIC14.1□□□□□ -0.15
NICN1Q9BSH3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 AL365209.1-201ENST00000624418 6473 ntBASIC14.1□□□□□ -0.15
NICN1Q9BSH3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
NICN1Q9BSH3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 RBM17P3-201ENST00000417687 1192 ntBASIC14.09□□□□□ -0.15
NICN1Q9BSH3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 SART3-203ENST00000546611 1184 ntBASIC14.09□□□□□ -0.15
NICN1Q9BSH3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 AF228730.7-201ENST00000641842 219 ntBASIC14.09□□□□□ -0.15
NICN1Q9BSH3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.09□□□□□ -0.15
NICN1Q9BSH3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NICN1Q9BSH3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms