Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.73□□□□□ -0.05
USB1Q9BQ65 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
USB1Q9BQ65 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
USB1Q9BQ65 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.73□□□□□ -0.05
USB1Q9BQ65 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.05
USB1Q9BQ65 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
USB1Q9BQ65 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
USB1Q9BQ65 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.73□□□□□ -0.05
USB1Q9BQ65 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.73□□□□□ -0.05
USB1Q9BQ65 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.73□□□□□ -0.05
USB1Q9BQ65 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
USB1Q9BQ65 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
USB1Q9BQ65 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
USB1Q9BQ65 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
USB1Q9BQ65 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 LINC02012-201ENST00000608206 1725 ntBASIC14.72□□□□□ -0.05
USB1Q9BQ65 FRMD8P1-201ENST00000440433 1524 ntBASIC14.72□□□□□ -0.05
USB1Q9BQ65 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 HMGA1P7-201ENST00000406908 502 ntBASIC14.72□□□□□ -0.05
USB1Q9BQ65 AL671277.1-201ENST00000429656 993 ntBASIC14.72□□□□□ -0.05
USB1Q9BQ65 AC022494.1-201ENST00000466044 728 ntBASIC14.72□□□□□ -0.05
USB1Q9BQ65 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 MPDU1-223ENST00000582151 728 ntBASIC14.72□□□□□ -0.05
USB1Q9BQ65 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 AC026120.1-201ENST00000611536 926 ntBASIC14.72□□□□□ -0.05
USB1Q9BQ65 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.72□□□□□ -0.05
USB1Q9BQ65 AL513210.1-201ENST00000629608 234 ntBASIC14.72□□□□□ -0.05
USB1Q9BQ65 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.72□□□□□ -0.05
USB1Q9BQ65 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
USB1Q9BQ65 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
USB1Q9BQ65 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
USB1Q9BQ65 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
USB1Q9BQ65 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
USB1Q9BQ65 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
USB1Q9BQ65 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
USB1Q9BQ65 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
USB1Q9BQ65 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
USB1Q9BQ65 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 SLC25A1P3-201ENST00000395415 828 ntBASIC14.71□□□□□ -0.05
USB1Q9BQ65 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
USB1Q9BQ65 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
USB1Q9BQ65 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
USB1Q9BQ65 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 AL009183.1-201ENST00000603760 355 ntBASIC14.71□□□□□ -0.05
USB1Q9BQ65 AC021097.1-201ENST00000607902 574 ntBASIC14.71□□□□□ -0.05
USB1Q9BQ65 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 AC105339.1-204ENST00000636249 355 ntBASIC14.71□□□□□ -0.05
USB1Q9BQ65 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
USB1Q9BQ65 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
USB1Q9BQ65 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
USB1Q9BQ65 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms