Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 IGHV3-42-201ENST00000520410 361 ntBASIC17.08■□□□□ 0.32
SMOQ99835 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.08■□□□□ 0.32
SMOQ99835 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.08■□□□□ 0.32
SMOQ99835 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.08■□□□□ 0.32
SMOQ99835 AL589739.1-201ENST00000607720 493 ntBASIC17.08■□□□□ 0.32
SMOQ99835 AL390754.1-201ENST00000619088 582 ntBASIC17.08■□□□□ 0.32
SMOQ99835 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SMOQ99835 AC099398.1-201ENST00000567919 2776 ntBASIC17.08■□□□□ 0.32
SMOQ99835 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
SMOQ99835 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMOQ99835 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMOQ99835 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMOQ99835 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMOQ99835 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMOQ99835 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.08■□□□□ 0.32
SMOQ99835 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMOQ99835 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMOQ99835 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.07■□□□□ 0.32
SMOQ99835 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SMOQ99835 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.07■□□□□ 0.32
SMOQ99835 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
SMOQ99835 AL136982.4-201ENST00000437689 1740 ntBASIC17.07■□□□□ 0.32
SMOQ99835 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMOQ99835 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMOQ99835 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMOQ99835 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.07■□□□□ 0.32
SMOQ99835 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SMOQ99835 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMOQ99835 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMOQ99835 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.07■□□□□ 0.32
SMOQ99835 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMOQ99835 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMOQ99835 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMOQ99835 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMOQ99835 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.07■□□□□ 0.32
SMOQ99835 AC027369.6-201ENST00000525520 931 ntBASIC17.07■□□□□ 0.32
SMOQ99835 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.07■□□□□ 0.32
SMOQ99835 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.07■□□□□ 0.32
SMOQ99835 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.07■□□□□ 0.32
SMOQ99835 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SMOQ99835 AL079307.3-201ENST00000556114 283 ntBASIC17.07■□□□□ 0.32
SMOQ99835 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.07■□□□□ 0.32
SMOQ99835 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SMOQ99835 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMOQ99835 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SMOQ99835 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMOQ99835 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMOQ99835 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SMOQ99835 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMOQ99835 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.07■□□□□ 0.32
SMOQ99835 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMOQ99835 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SMOQ99835 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.06■□□□□ 0.32
SMOQ99835 CETN4P-206ENST00000642099 2168 ntBASIC17.06■□□□□ 0.32
SMOQ99835 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SMOQ99835 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.06■□□□□ 0.32
SMOQ99835 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.06■□□□□ 0.32
SMOQ99835 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SMOQ99835 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SMOQ99835 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SMOQ99835 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.06■□□□□ 0.32
SMOQ99835 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.06■□□□□ 0.32
SMOQ99835 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.06■□□□□ 0.32
SMOQ99835 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.06■□□□□ 0.32
SMOQ99835 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.06■□□□□ 0.32
SMOQ99835 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SMOQ99835 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.06■□□□□ 0.32
SMOQ99835 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.06■□□□□ 0.32
SMOQ99835 AL139010.1-201ENST00000454878 894 ntBASIC17.06■□□□□ 0.32
SMOQ99835 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.06■□□□□ 0.32
SMOQ99835 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.06■□□□□ 0.32
SMOQ99835 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.06■□□□□ 0.32
SMOQ99835 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.06■□□□□ 0.32
SMOQ99835 AC026979.3-201ENST00000607315 403 ntBASIC17.06■□□□□ 0.32
SMOQ99835 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.06■□□□□ 0.32
SMOQ99835 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SMOQ99835 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SMOQ99835 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMOQ99835 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SMOQ99835 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SMOQ99835 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.05■□□□□ 0.32
SMOQ99835 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms