Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
EYA3Q99504 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EYA3Q99504 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.73■□□□□ 0.75
EYA3Q99504 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EYA3Q99504 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.73■□□□□ 0.75
EYA3Q99504 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.73■□□□□ 0.75
EYA3Q99504 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
EYA3Q99504 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
EYA3Q99504 MIR8072-201ENST00000614241 80 ntBASIC19.73■□□□□ 0.75
EYA3Q99504 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EYA3Q99504 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
EYA3Q99504 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.73■□□□□ 0.75
EYA3Q99504 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EYA3Q99504 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EYA3Q99504 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EYA3Q99504 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.72■□□□□ 0.75
EYA3Q99504 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.72■□□□□ 0.75
EYA3Q99504 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EYA3Q99504 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.72■□□□□ 0.75
EYA3Q99504 TMEM14DP-201ENST00000422205 345 ntBASIC19.72■□□□□ 0.75
EYA3Q99504 HIST3H2BA-201ENST00000436555 524 ntBASIC19.72■□□□□ 0.75
EYA3Q99504 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.72■□□□□ 0.75
EYA3Q99504 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19.72■□□□□ 0.75
EYA3Q99504 AC015936.2-201ENST00000593177 259 ntBASIC19.72■□□□□ 0.75
EYA3Q99504 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.72■□□□□ 0.75
EYA3Q99504 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.72■□□□□ 0.75
EYA3Q99504 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EYA3Q99504 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EYA3Q99504 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EYA3Q99504 CLK3P2-201ENST00000427566 1453 ntBASIC19.72■□□□□ 0.75
EYA3Q99504 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.72■□□□□ 0.75
EYA3Q99504 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EYA3Q99504 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
EYA3Q99504 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
EYA3Q99504 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
EYA3Q99504 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
EYA3Q99504 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.71■□□□□ 0.75
EYA3Q99504 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.71■□□□□ 0.75
EYA3Q99504 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.71■□□□□ 0.75
EYA3Q99504 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.71■□□□□ 0.75
EYA3Q99504 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.71■□□□□ 0.75
EYA3Q99504 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.71■□□□□ 0.75
EYA3Q99504 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.71■□□□□ 0.75
EYA3Q99504 AP005482.1-201ENST00000563722 1273 ntBASIC19.71■□□□□ 0.75
EYA3Q99504 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.71■□□□□ 0.75
EYA3Q99504 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.71■□□□□ 0.75
EYA3Q99504 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.71■□□□□ 0.75
EYA3Q99504 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.71■□□□□ 0.75
EYA3Q99504 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
EYA3Q99504 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
EYA3Q99504 AL136982.4-201ENST00000437689 1740 ntBASIC19.71■□□□□ 0.75
EYA3Q99504 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EYA3Q99504 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
EYA3Q99504 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EYA3Q99504 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.7■□□□□ 0.74
EYA3Q99504 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
EYA3Q99504 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EYA3Q99504 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EYA3Q99504 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EYA3Q99504 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EYA3Q99504 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EYA3Q99504 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.7■□□□□ 0.74
EYA3Q99504 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EYA3Q99504 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EYA3Q99504 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EYA3Q99504 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.7■□□□□ 0.74
EYA3Q99504 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.7■□□□□ 0.74
EYA3Q99504 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.7■□□□□ 0.74
EYA3Q99504 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.7■□□□□ 0.74
EYA3Q99504 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.7■□□□□ 0.74
EYA3Q99504 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.7■□□□□ 0.74
EYA3Q99504 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.7■□□□□ 0.74
EYA3Q99504 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.7■□□□□ 0.74
EYA3Q99504 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EYA3Q99504 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.7■□□□□ 0.74
EYA3Q99504 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EYA3Q99504 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EYA3Q99504 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EYA3Q99504 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EYA3Q99504 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms