Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH4Q99466 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH4Q99466 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.59■□□□□ 0.25
NOTCH4Q99466 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH4Q99466 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH4Q99466 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH4Q99466 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH4Q99466 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH4Q99466 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH4Q99466 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH4Q99466 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH4Q99466 AC080080.1-201ENST00000625121 2420 ntBASIC16.59■□□□□ 0.25
NOTCH4Q99466 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
NOTCH4Q99466 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.58■□□□□ 0.25
NOTCH4Q99466 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NOTCH4Q99466 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NOTCH4Q99466 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
NOTCH4Q99466 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
NOTCH4Q99466 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.58■□□□□ 0.25
NOTCH4Q99466 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.58■□□□□ 0.25
NOTCH4Q99466 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.58■□□□□ 0.25
NOTCH4Q99466 FTH1P14-201ENST00000482930 551 ntBASIC16.58■□□□□ 0.25
NOTCH4Q99466 AC104596.2-201ENST00000512793 793 ntBASIC16.58■□□□□ 0.25
NOTCH4Q99466 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.58■□□□□ 0.25
NOTCH4Q99466 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.58■□□□□ 0.25
NOTCH4Q99466 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.58■□□□□ 0.25
NOTCH4Q99466 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.58■□□□□ 0.25
NOTCH4Q99466 AC233724.13-201ENST00000598383 410 ntBASIC16.58■□□□□ 0.25
NOTCH4Q99466 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NOTCH4Q99466 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NOTCH4Q99466 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
NOTCH4Q99466 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
NOTCH4Q99466 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
NOTCH4Q99466 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NOTCH4Q99466 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.58■□□□□ 0.25
NOTCH4Q99466 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NOTCH4Q99466 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH4Q99466 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NOTCH4Q99466 AC020763.4-201ENST00000623414 4170 ntBASIC16.58■□□□□ 0.24
NOTCH4Q99466 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH4Q99466 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH4Q99466 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH4Q99466 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
NOTCH4Q99466 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH4Q99466 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.58■□□□□ 0.24
NOTCH4Q99466 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.58■□□□□ 0.24
NOTCH4Q99466 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.58■□□□□ 0.24
NOTCH4Q99466 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH4Q99466 CU634019.7-201ENST00000624153 1185 ntBASIC16.58■□□□□ 0.24
NOTCH4Q99466 FP236241.2-201ENST00000624906 1185 ntBASIC16.58■□□□□ 0.24
NOTCH4Q99466 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH4Q99466 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.58■□□□□ 0.24
NOTCH4Q99466 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH4Q99466 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH4Q99466 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH4Q99466 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH4Q99466 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.58■□□□□ 0.24
NOTCH4Q99466 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH4Q99466 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH4Q99466 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.57■□□□□ 0.24
NOTCH4Q99466 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NOTCH4Q99466 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.57■□□□□ 0.24
NOTCH4Q99466 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH4Q99466 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH4Q99466 AC099336.1-201ENST00000417053 1171 ntBASIC16.57■□□□□ 0.24
NOTCH4Q99466 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.57■□□□□ 0.24
NOTCH4Q99466 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH4Q99466 TIMM17BP1-201ENST00000545713 516 ntBASIC16.57■□□□□ 0.24
NOTCH4Q99466 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
NOTCH4Q99466 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.57■□□□□ 0.24
NOTCH4Q99466 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH4Q99466 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.57■□□□□ 0.24
NOTCH4Q99466 AL049840.4-201ENST00000602422 811 ntBASIC16.57■□□□□ 0.24
NOTCH4Q99466 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.57■□□□□ 0.24
NOTCH4Q99466 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
NOTCH4Q99466 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH4Q99466 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH4Q99466 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.57■□□□□ 0.24
NOTCH4Q99466 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH4Q99466 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.57■□□□□ 0.24
NOTCH4Q99466 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NOTCH4Q99466 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH4Q99466 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH4Q99466 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH4Q99466 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
NOTCH4Q99466 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms