Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEK1Q96PY6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NEK1Q96PY6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.35■□□□□ 0.69
NEK1Q96PY6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEK1Q96PY6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEK1Q96PY6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NEK1Q96PY6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.35■□□□□ 0.69
NEK1Q96PY6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEK1Q96PY6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEK1Q96PY6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEK1Q96PY6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEK1Q96PY6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEK1Q96PY6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NEK1Q96PY6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.35■□□□□ 0.69
NEK1Q96PY6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.35■□□□□ 0.69
NEK1Q96PY6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
NEK1Q96PY6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.35■□□□□ 0.69
NEK1Q96PY6 AC092183.1-201ENST00000469884 875 ntBASIC19.35■□□□□ 0.69
NEK1Q96PY6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.35■□□□□ 0.69
NEK1Q96PY6 FAM86C2P-203ENST00000528684 1004 ntBASIC19.35■□□□□ 0.69
NEK1Q96PY6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.35■□□□□ 0.69
NEK1Q96PY6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEK1Q96PY6 AC022188.1-201ENST00000620960 1664 ntBASIC19.35■□□□□ 0.69
NEK1Q96PY6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEK1Q96PY6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.35■□□□□ 0.69
NEK1Q96PY6 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.35■□□□□ 0.69
NEK1Q96PY6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.35■□□□□ 0.69
NEK1Q96PY6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
NEK1Q96PY6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.35■□□□□ 0.69
NEK1Q96PY6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEK1Q96PY6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEK1Q96PY6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEK1Q96PY6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEK1Q96PY6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEK1Q96PY6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEK1Q96PY6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEK1Q96PY6 MIR648-201ENST00000385046 94 ntBASIC19.34■□□□□ 0.69
NEK1Q96PY6 BX842568.4-201ENST00000421222 227 ntBASIC19.34■□□□□ 0.69
NEK1Q96PY6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEK1Q96PY6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEK1Q96PY6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEK1Q96PY6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEK1Q96PY6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEK1Q96PY6 CDC14C-201ENST00000428251 1719 ntBASIC19.34■□□□□ 0.69
NEK1Q96PY6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEK1Q96PY6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEK1Q96PY6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.34■□□□□ 0.69
NEK1Q96PY6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEK1Q96PY6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NEK1Q96PY6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
NEK1Q96PY6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NEK1Q96PY6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NEK1Q96PY6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NEK1Q96PY6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.33■□□□□ 0.69
NEK1Q96PY6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NEK1Q96PY6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEK1Q96PY6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEK1Q96PY6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEK1Q96PY6 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.33■□□□□ 0.68
NEK1Q96PY6 MKNK2P1-201ENST00000437526 628 ntBASIC19.33■□□□□ 0.68
NEK1Q96PY6 ALG1L5P-201ENST00000482043 771 ntBASIC19.33■□□□□ 0.68
NEK1Q96PY6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.33■□□□□ 0.68
NEK1Q96PY6 AC243562.1-201ENST00000560672 389 ntBASIC19.33■□□□□ 0.68
NEK1Q96PY6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.33■□□□□ 0.68
NEK1Q96PY6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.33■□□□□ 0.68
NEK1Q96PY6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NEK1Q96PY6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.33■□□□□ 0.68
NEK1Q96PY6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEK1Q96PY6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.33■□□□□ 0.68
NEK1Q96PY6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
NEK1Q96PY6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NEK1Q96PY6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEK1Q96PY6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEK1Q96PY6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NEK1Q96PY6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.33■□□□□ 0.68
NEK1Q96PY6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms