Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
MS4A4EQ96PG1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 AC073439.1-201ENST00000624121 1774 ntBASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 MIR648-201ENST00000385046 94 ntBASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MS4A4EQ96PG1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 AL022342.1-201ENST00000400363 863 ntBASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 PRYP6-201ENST00000514804 343 ntBASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 KRT18P58-201ENST00000527480 1120 ntBASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 AC040169.1-201ENST00000565382 521 ntBASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 RARRES2P8-201ENST00000566335 367 ntBASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 AC099522.2-201ENST00000607001 744 ntBASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A4EQ96PG1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 AC024909.3-201ENST00000611513 2257 ntBASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.27■□□□□ 0.04
MS4A4EQ96PG1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms