Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC46A1Q96NT5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC46A1Q96NT5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC46A1Q96NT5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC46A1Q96NT5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC46A1Q96NT5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC46A1Q96NT5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC46A1Q96NT5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SLC46A1Q96NT5 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC46A1Q96NT5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 RPS2P32-201ENST00000439199 892 ntBASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 ACA64.2-201ENST00000459014 129 ntBASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 RN7SL618P-201ENST00000477850 296 ntBASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 CHCHD2P3-201ENST00000603038 451 ntBASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC46A1Q96NT5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SLC46A1Q96NT5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
SLC46A1Q96NT5 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.58■□□□□ 0.09
SLC46A1Q96NT5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC46A1Q96NT5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC46A1Q96NT5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC46A1Q96NT5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC46A1Q96NT5 AC106886.4-201ENST00000623557 2502 ntBASIC15.58■□□□□ 0.09
SLC46A1Q96NT5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC46A1Q96NT5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC46A1Q96NT5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 AC008494.3-201ENST00000606615 944 ntBASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 MIR6805-201ENST00000615055 62 ntBASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms