Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 AZGP1P1-201ENST00000411909 902 ntBASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 CALR4P-201ENST00000431943 946 ntBASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 AC012441.1-201ENST00000446669 685 ntBASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 KRT90P-201ENST00000549264 1064 ntBASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 AC008687.7-202ENST00000637404 953 ntBASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM43Q96BQ3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 AC093433.1-201ENST00000458048 571 ntBASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 AP001258.2-201ENST00000529891 490 ntBASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 AC009486.1-201ENST00000569860 813 ntBASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 AL022328.3-201ENST00000607943 679 ntBASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRIM43Q96BQ3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
TRIM43Q96BQ3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.52■□□□□ 0.39
TRIM43Q96BQ3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM43Q96BQ3 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.52■□□□□ 0.39
TRIM43Q96BQ3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM43Q96BQ3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TRIM43Q96BQ3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM43Q96BQ3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.52■□□□□ 0.39
TRIM43Q96BQ3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM43Q96BQ3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 AC120045.2-201ENST00000567334 178 ntBASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 AC005622.1-201ENST00000636801 1703 ntBASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms