Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC010654.1-201ENST00000615722 808 ntBASIC15.8■□□□□ 0.12
VPS33AQ96AX1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 AC093458.2-201ENST00000623150 629 ntBASIC15.8■□□□□ 0.12
VPS33AQ96AX1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 AL355877.3-201ENST00000622820 899 ntBASIC15.79■□□□□ 0.12
VPS33AQ96AX1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS33AQ96AX1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 AL353732.1-201ENST00000569618 1459 ntBASIC15.78■□□□□ 0.12
VPS33AQ96AX1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.78■□□□□ 0.12
VPS33AQ96AX1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 ELK2BP-201ENST00000415014 1224 ntBASIC15.78■□□□□ 0.12
VPS33AQ96AX1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 AC091076.1-201ENST00000610741 619 ntBASIC15.78■□□□□ 0.12
VPS33AQ96AX1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS33AQ96AX1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms