Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 HYMAI-201ENST00000635591 3347 ntBASIC16.58■□□□□ 0.25
CDKL2Q92772 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDKL2Q92772 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
CDKL2Q92772 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.58■□□□□ 0.25
CDKL2Q92772 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
CDKL2Q92772 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDKL2Q92772 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDKL2Q92772 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CDKL2Q92772 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
CDKL2Q92772 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDKL2Q92772 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CDKL2Q92772 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDKL2Q92772 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CDKL2Q92772 MIR1224-201ENST00000408193 85 ntBASIC16.58■□□□□ 0.24
CDKL2Q92772 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.58■□□□□ 0.24
CDKL2Q92772 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDKL2Q92772 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.58■□□□□ 0.24
CDKL2Q92772 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.58■□□□□ 0.24
CDKL2Q92772 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.58■□□□□ 0.24
CDKL2Q92772 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.58■□□□□ 0.24
CDKL2Q92772 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.58■□□□□ 0.24
CDKL2Q92772 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
CDKL2Q92772 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.58■□□□□ 0.24
CDKL2Q92772 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKL2Q92772 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.58■□□□□ 0.24
CDKL2Q92772 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDKL2Q92772 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.58■□□□□ 0.24
CDKL2Q92772 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDKL2Q92772 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKL2Q92772 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKL2Q92772 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.58■□□□□ 0.24
CDKL2Q92772 CDC14C-201ENST00000428251 1719 ntBASIC16.58■□□□□ 0.24
CDKL2Q92772 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDKL2Q92772 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.58■□□□□ 0.24
CDKL2Q92772 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.58■□□□□ 0.24
CDKL2Q92772 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.58■□□□□ 0.24
CDKL2Q92772 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDKL2Q92772 LINC02447-202ENST00000501888 2146 ntBASIC16.58■□□□□ 0.24
CDKL2Q92772 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKL2Q92772 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKL2Q92772 AL513477.1-201ENST00000602865 2407 ntBASIC16.58■□□□□ 0.24
CDKL2Q92772 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDKL2Q92772 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDKL2Q92772 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDKL2Q92772 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.58■□□□□ 0.24
CDKL2Q92772 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDKL2Q92772 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CDKL2Q92772 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.57■□□□□ 0.24
CDKL2Q92772 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.57■□□□□ 0.24
CDKL2Q92772 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.57■□□□□ 0.24
CDKL2Q92772 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.57■□□□□ 0.24
CDKL2Q92772 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.57■□□□□ 0.24
CDKL2Q92772 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.57■□□□□ 0.24
CDKL2Q92772 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.57■□□□□ 0.24
CDKL2Q92772 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
CDKL2Q92772 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.57■□□□□ 0.24
CDKL2Q92772 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.57■□□□□ 0.24
CDKL2Q92772 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDKL2Q92772 MRPL20P1-201ENST00000400819 433 ntBASIC16.57■□□□□ 0.24
CDKL2Q92772 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.57■□□□□ 0.24
CDKL2Q92772 DUSP5P1-201ENST00000441325 1139 ntBASIC16.57■□□□□ 0.24
CDKL2Q92772 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.57■□□□□ 0.24
CDKL2Q92772 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.57■□□□□ 0.24
CDKL2Q92772 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 AC005593.1-201ENST00000624894 515 ntBASIC16.57■□□□□ 0.24
CDKL2Q92772 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.57■□□□□ 0.24
CDKL2Q92772 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.57■□□□□ 0.24
CDKL2Q92772 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.57■□□□□ 0.24
CDKL2Q92772 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.57■□□□□ 0.24
CDKL2Q92772 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDKL2Q92772 AP005117.1-202ENST00000581724 1908 ntBASIC16.57■□□□□ 0.24
CDKL2Q92772 U82695.1-201ENST00000635752 1889 ntBASIC16.56■□□□□ 0.24
CDKL2Q92772 AC005622.1-201ENST00000636801 1703 ntBASIC16.56■□□□□ 0.24
CDKL2Q92772 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL2Q92772 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL2Q92772 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.56■□□□□ 0.24
CDKL2Q92772 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL2Q92772 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.56■□□□□ 0.24
CDKL2Q92772 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL2Q92772 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDKL2Q92772 AL592424.1-201ENST00000563624 1536 ntBASIC16.56■□□□□ 0.24
CDKL2Q92772 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL2Q92772 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms