Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.99■□□□□ 0.79
RTL9Q8NET4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.99■□□□□ 0.79
RTL9Q8NET4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.99■□□□□ 0.79
RTL9Q8NET4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.99■□□□□ 0.79
RTL9Q8NET4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.99■□□□□ 0.79
RTL9Q8NET4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RTL9Q8NET4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.99■□□□□ 0.79
RTL9Q8NET4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RTL9Q8NET4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
RTL9Q8NET4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.98■□□□□ 0.79
RTL9Q8NET4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.98■□□□□ 0.79
RTL9Q8NET4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RTL9Q8NET4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL9Q8NET4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL9Q8NET4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RTL9Q8NET4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RTL9Q8NET4 AC098614.1-201ENST00000368528 745 ntBASIC19.98■□□□□ 0.79
RTL9Q8NET4 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.98■□□□□ 0.79
RTL9Q8NET4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL9Q8NET4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.98■□□□□ 0.79
RTL9Q8NET4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.98■□□□□ 0.79
RTL9Q8NET4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.98■□□□□ 0.79
RTL9Q8NET4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.98■□□□□ 0.79
RTL9Q8NET4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTL9Q8NET4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL9Q8NET4 CHCHD2P3-201ENST00000603038 451 ntBASIC19.98■□□□□ 0.79
RTL9Q8NET4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTL9Q8NET4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTL9Q8NET4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTL9Q8NET4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL9Q8NET4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL9Q8NET4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RTL9Q8NET4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL9Q8NET4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTL9Q8NET4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.98■□□□□ 0.79
RTL9Q8NET4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL9Q8NET4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RTL9Q8NET4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.98■□□□□ 0.79
RTL9Q8NET4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.97■□□□□ 0.79
RTL9Q8NET4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTL9Q8NET4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.97■□□□□ 0.79
RTL9Q8NET4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL9Q8NET4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
RTL9Q8NET4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.97■□□□□ 0.79
RTL9Q8NET4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.97■□□□□ 0.79
RTL9Q8NET4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
RTL9Q8NET4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL9Q8NET4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL9Q8NET4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL9Q8NET4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL9Q8NET4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
RTL9Q8NET4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
RTL9Q8NET4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL9Q8NET4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL9Q8NET4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.97■□□□□ 0.79
RTL9Q8NET4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL9Q8NET4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL9Q8NET4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RTL9Q8NET4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RTL9Q8NET4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RTL9Q8NET4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RTL9Q8NET4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTL9Q8NET4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL9Q8NET4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL9Q8NET4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL9Q8NET4 AC004987.2-201ENST00000395959 1148 ntBASIC19.96■□□□□ 0.79
RTL9Q8NET4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 AL589987.1-201ENST00000453380 819 ntBASIC19.96■□□□□ 0.79
RTL9Q8NET4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 AC132938.2-201ENST00000579188 680 ntBASIC19.96■□□□□ 0.79
RTL9Q8NET4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 AL591163.1-201ENST00000641757 987 ntBASIC19.96■□□□□ 0.79
RTL9Q8NET4 Z97205.2-201ENST00000564697 1639 ntBASIC19.96■□□□□ 0.79
RTL9Q8NET4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL9Q8NET4 AL691432.1-201ENST00000596308 1422 ntBASIC19.96■□□□□ 0.79
RTL9Q8NET4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms