Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16■□□□□ 0.15
HIPK4Q8NE63 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16■□□□□ 0.15
HIPK4Q8NE63 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIPK4Q8NE63 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HIPK4Q8NE63 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIPK4Q8NE63 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 LINC00895-201ENST00000629028 1637 ntBASIC15.99■□□□□ 0.15
HIPK4Q8NE63 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.99■□□□□ 0.15
HIPK4Q8NE63 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 AC016734.2-201ENST00000624325 1377 ntBASIC15.99■□□□□ 0.15
HIPK4Q8NE63 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.99■□□□□ 0.15
HIPK4Q8NE63 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 AL031133.1-201ENST00000406807 723 ntBASIC15.98■□□□□ 0.15
HIPK4Q8NE63 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 KRT18P21-201ENST00000515767 1272 ntBASIC15.98■□□□□ 0.15
HIPK4Q8NE63 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 Z69720.1-201ENST00000601483 472 ntBASIC15.98■□□□□ 0.15
HIPK4Q8NE63 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 AC233702.3-201ENST00000578656 1387 ntBASIC15.98■□□□□ 0.15
HIPK4Q8NE63 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIPK4Q8NE63 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 AC005332.1-201ENST00000577698 1310 ntBASIC15.97■□□□□ 0.15
HIPK4Q8NE63 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIPK4Q8NE63 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms