Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 FAM210CP-201ENST00000445714 574 ntBASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 AC008667.4-201ENST00000607370 168 ntBASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 REXO1L6P-202ENST00000619970 1078 ntBASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 AC073621.1-201ENST00000392730 636 ntBASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 DUSP5P1-201ENST00000441325 1139 ntBASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 AC021097.1-201ENST00000607902 574 ntBASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 FLJ16779-201ENST00000612722 7638 ntBASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC170Q8IYT3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 SSR4P1-203ENST00000599569 2260 ntBASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 AC020658.6-201ENST00000623564 1870 ntBASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 AC136632.2-201ENST00000512891 861 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms