Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 AL162727.3-201ENST00000635661 2787 ntBASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 AL603832.2-201ENST00000566195 2125 ntBASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 HLA-A-201ENST00000376802 1334 ntBASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 HCG4B-203ENST00000450128 991 ntBASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 AL662844.1-201ENST00000546340 181 ntBASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 AL645728.2-201ENST00000641974 660 ntBASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00346Q8IVM7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
LINC00346Q8IVM7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
LINC00346Q8IVM7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00346Q8IVM7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00346Q8IVM7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00346Q8IVM7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00346Q8IVM7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00346Q8IVM7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.08
LINC00346Q8IVM7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LINC00346Q8IVM7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.52□□□□□ -0.08
LINC00346Q8IVM7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00346Q8IVM7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LINC00346Q8IVM7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00346Q8IVM7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00346Q8IVM7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 TPM4P1-201ENST00000436100 807 ntBASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 AC021097.1-201ENST00000607902 574 ntBASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
LINC00346Q8IVM7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms