Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC024267.1-201ENST00000582320 895 ntBASIC19.67■□□□□ 0.74
RFX7Q2KHR2 AC239800.4-201ENST00000603712 296 ntBASIC19.67■□□□□ 0.74
RFX7Q2KHR2 AL844908.2-201ENST00000609461 460 ntBASIC19.67■□□□□ 0.74
RFX7Q2KHR2 AC012645.4-201ENST00000610691 1061 ntBASIC19.67■□□□□ 0.74
RFX7Q2KHR2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.67■□□□□ 0.74
RFX7Q2KHR2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 CRB3P1-201ENST00000449338 276 ntBASIC19.66■□□□□ 0.74
RFX7Q2KHR2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 TEX28P1-201ENST00000613479 1221 ntBASIC19.66■□□□□ 0.74
RFX7Q2KHR2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 TEX28P2-201ENST00000617764 1221 ntBASIC19.66■□□□□ 0.74
RFX7Q2KHR2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 DOC2GP-204ENST00000639052 2548 ntBASIC19.66■□□□□ 0.74
RFX7Q2KHR2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.66■□□□□ 0.74
RFX7Q2KHR2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.65■□□□□ 0.74
RFX7Q2KHR2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 AL133215.2-201ENST00000609242 977 ntBASIC19.65■□□□□ 0.74
RFX7Q2KHR2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX7Q2KHR2 AC022144.1-201ENST00000602255 1580 ntBASIC19.64■□□□□ 0.74
RFX7Q2KHR2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
RFX7Q2KHR2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFX7Q2KHR2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 AL662844.4-201ENST00000606367 2838 ntBASIC19.64■□□□□ 0.73
RFX7Q2KHR2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 AC003101.2-201ENST00000612557 442 ntBASIC19.64■□□□□ 0.73
RFX7Q2KHR2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.64■□□□□ 0.73
RFX7Q2KHR2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RFX7Q2KHR2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms