Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
KCNA1Q09470 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
KCNA1Q09470 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.97■□□□□ 0.47
KCNA1Q09470 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
KCNA1Q09470 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.97■□□□□ 0.47
KCNA1Q09470 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
KCNA1Q09470 AC105233.2-201ENST00000523697 349 ntBASIC17.97■□□□□ 0.47
KCNA1Q09470 AF228730.5-201ENST00000530288 346 ntBASIC17.97■□□□□ 0.47
KCNA1Q09470 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
KCNA1Q09470 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.97■□□□□ 0.47
KCNA1Q09470 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.97■□□□□ 0.47
KCNA1Q09470 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.97■□□□□ 0.47
KCNA1Q09470 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.97■□□□□ 0.47
KCNA1Q09470 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.97■□□□□ 0.47
KCNA1Q09470 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.97■□□□□ 0.47
KCNA1Q09470 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.97■□□□□ 0.47
KCNA1Q09470 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.97■□□□□ 0.47
KCNA1Q09470 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.97■□□□□ 0.47
KCNA1Q09470 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
KCNA1Q09470 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.97■□□□□ 0.47
KCNA1Q09470 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
KCNA1Q09470 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
KCNA1Q09470 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KCNA1Q09470 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA1Q09470 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA1Q09470 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.96■□□□□ 0.47
KCNA1Q09470 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA1Q09470 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.96■□□□□ 0.47
KCNA1Q09470 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
KCNA1Q09470 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
KCNA1Q09470 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
KCNA1Q09470 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.96■□□□□ 0.47
KCNA1Q09470 MIR1233-2-201ENST00000408138 82 ntBASIC17.96■□□□□ 0.47
KCNA1Q09470 MIR1233-1-201ENST00000408722 82 ntBASIC17.96■□□□□ 0.47
KCNA1Q09470 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.96■□□□□ 0.47
KCNA1Q09470 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA1Q09470 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA1Q09470 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
KCNA1Q09470 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA1Q09470 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.96■□□□□ 0.47
KCNA1Q09470 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.96■□□□□ 0.47
KCNA1Q09470 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.96■□□□□ 0.47
KCNA1Q09470 SLC25A39P2-201ENST00000537614 270 ntBASIC17.96■□□□□ 0.47
KCNA1Q09470 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
KCNA1Q09470 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.96■□□□□ 0.47
KCNA1Q09470 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.96■□□□□ 0.47
KCNA1Q09470 AC084121.4-201ENST00000641598 221 ntBASIC17.96■□□□□ 0.47
KCNA1Q09470 AF228730.8-201ENST00000642140 221 ntBASIC17.96■□□□□ 0.47
KCNA1Q09470 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA1Q09470 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA1Q09470 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA1Q09470 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.96■□□□□ 0.47
KCNA1Q09470 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
KCNA1Q09470 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
KCNA1Q09470 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.96■□□□□ 0.47
KCNA1Q09470 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.96■□□□□ 0.47
KCNA1Q09470 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.96■□□□□ 0.47
KCNA1Q09470 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA1Q09470 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
KCNA1Q09470 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA1Q09470 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.96■□□□□ 0.47
KCNA1Q09470 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
KCNA1Q09470 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KCNA1Q09470 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
KCNA1Q09470 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.95■□□□□ 0.46
KCNA1Q09470 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA1Q09470 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA1Q09470 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA1Q09470 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.95■□□□□ 0.46
KCNA1Q09470 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA1Q09470 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
KCNA1Q09470 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.95■□□□□ 0.46
KCNA1Q09470 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA1Q09470 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.95■□□□□ 0.46
KCNA1Q09470 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
KCNA1Q09470 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA1Q09470 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA1Q09470 UXT-AS1-201ENST00000590504 1525 ntBASIC17.95■□□□□ 0.46
KCNA1Q09470 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA1Q09470 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA1Q09470 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.95■□□□□ 0.46
KCNA1Q09470 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.95■□□□□ 0.46
KCNA1Q09470 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KCNA1Q09470 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms