Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TPM4P67936 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.43■□□□□ 0.54
TPM4P67936 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.43■□□□□ 0.54
TPM4P67936 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.43■□□□□ 0.54
TPM4P67936 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.43■□□□□ 0.54
TPM4P67936 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.43■□□□□ 0.54
TPM4P67936 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.43■□□□□ 0.54
TPM4P67936 AC020765.3-201ENST00000613051 740 ntBASIC18.43■□□□□ 0.54
TPM4P67936 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TPM4P67936 AL022326.1-202ENST00000641533 845 ntBASIC18.43■□□□□ 0.54
TPM4P67936 AC112504.1-201ENST00000623415 1841 ntBASIC18.43■□□□□ 0.54
TPM4P67936 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TPM4P67936 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TPM4P67936 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.43■□□□□ 0.54
TPM4P67936 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TPM4P67936 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.43■□□□□ 0.54
TPM4P67936 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.43■□□□□ 0.54
TPM4P67936 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM4P67936 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TPM4P67936 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TPM4P67936 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TPM4P67936 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TPM4P67936 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TPM4P67936 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.42■□□□□ 0.54
TPM4P67936 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM4P67936 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM4P67936 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TPM4P67936 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM4P67936 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
TPM4P67936 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM4P67936 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM4P67936 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM4P67936 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.42■□□□□ 0.54
TPM4P67936 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
TPM4P67936 PAWRP1-201ENST00000451083 565 ntBASIC18.42■□□□□ 0.54
TPM4P67936 BX005266.1-201ENST00000473402 457 ntBASIC18.42■□□□□ 0.54
TPM4P67936 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.42■□□□□ 0.54
TPM4P67936 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.42■□□□□ 0.54
TPM4P67936 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.42■□□□□ 0.54
TPM4P67936 MIR5100-201ENST00000579544 119 ntBASIC18.42■□□□□ 0.54
TPM4P67936 AL139424.1-201ENST00000607572 797 ntBASIC18.42■□□□□ 0.54
TPM4P67936 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TPM4P67936 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TPM4P67936 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.42■□□□□ 0.54
TPM4P67936 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TPM4P67936 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM4P67936 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TPM4P67936 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TPM4P67936 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.42■□□□□ 0.54
TPM4P67936 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM4P67936 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM4P67936 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TPM4P67936 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TPM4P67936 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
TPM4P67936 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TPM4P67936 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TPM4P67936 PRAL-201ENST00000624952 3286 ntBASIC18.41■□□□□ 0.54
TPM4P67936 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TPM4P67936 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.41■□□□□ 0.54
TPM4P67936 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.41■□□□□ 0.54
TPM4P67936 RCN1P1-201ENST00000400413 996 ntBASIC18.41■□□□□ 0.54
TPM4P67936 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.41■□□□□ 0.54
TPM4P67936 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.41■□□□□ 0.54
TPM4P67936 CYP2A7P1-201ENST00000595391 815 ntBASIC18.41■□□□□ 0.54
TPM4P67936 AC064862.7-201ENST00000604520 867 ntBASIC18.41■□□□□ 0.54
TPM4P67936 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.41■□□□□ 0.54
TPM4P67936 AC010654.1-201ENST00000615722 808 ntBASIC18.41■□□□□ 0.54
TPM4P67936 AF228730.7-201ENST00000641842 219 ntBASIC18.41■□□□□ 0.54
TPM4P67936 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
TPM4P67936 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.41■□□□□ 0.54
TPM4P67936 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.41■□□□□ 0.54
TPM4P67936 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM4P67936 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms