Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.22□□□□□ -0.13
UBA52P62987 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBA52P62987 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
UBA52P62987 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.22□□□□□ -0.13
UBA52P62987 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBA52P62987 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.22□□□□□ -0.13
UBA52P62987 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBA52P62987 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBA52P62987 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
UBA52P62987 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBA52P62987 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
UBA52P62987 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
UBA52P62987 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.22□□□□□ -0.13
UBA52P62987 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.22□□□□□ -0.13
UBA52P62987 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.22□□□□□ -0.13
UBA52P62987 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.22□□□□□ -0.13
UBA52P62987 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.21□□□□□ -0.13
UBA52P62987 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.21□□□□□ -0.13
UBA52P62987 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
UBA52P62987 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
UBA52P62987 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
UBA52P62987 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
UBA52P62987 AC007967.3-201ENST00000434308 558 ntBASIC14.21□□□□□ -0.13
UBA52P62987 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 AC009947.1-201ENST00000444350 727 ntBASIC14.21□□□□□ -0.13
UBA52P62987 BX005266.1-201ENST00000473402 457 ntBASIC14.21□□□□□ -0.13
UBA52P62987 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.21□□□□□ -0.13
UBA52P62987 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.21□□□□□ -0.13
UBA52P62987 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
UBA52P62987 AL355385.1-201ENST00000606123 409 ntBASIC14.21□□□□□ -0.13
UBA52P62987 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.21□□□□□ -0.13
UBA52P62987 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.21□□□□□ -0.13
UBA52P62987 AL022326.1-202ENST00000641533 845 ntBASIC14.21□□□□□ -0.13
UBA52P62987 TNRC18P2-201ENST00000417666 2714 ntBASIC14.21□□□□□ -0.13
UBA52P62987 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBA52P62987 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
UBA52P62987 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
UBA52P62987 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
UBA52P62987 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
UBA52P62987 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.21□□□□□ -0.14
UBA52P62987 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBA52P62987 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBA52P62987 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBA52P62987 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
UBA52P62987 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBA52P62987 AL009178.2-201ENST00000597278 2719 ntBASIC14.21□□□□□ -0.14
UBA52P62987 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBA52P62987 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
UBA52P62987 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
UBA52P62987 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UBA52P62987 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.2□□□□□ -0.14
UBA52P62987 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.2□□□□□ -0.14
UBA52P62987 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
UBA52P62987 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 AC079776.2-201ENST00000641154 1609 ntBASIC14.2□□□□□ -0.14
UBA52P62987 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
UBA52P62987 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.2□□□□□ -0.14
UBA52P62987 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
UBA52P62987 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.2□□□□□ -0.14
UBA52P62987 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.2□□□□□ -0.14
UBA52P62987 HMGN1P19-201ENST00000436976 333 ntBASIC14.2□□□□□ -0.14
UBA52P62987 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
UBA52P62987 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.2□□□□□ -0.14
UBA52P62987 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
UBA52P62987 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.2□□□□□ -0.14
UBA52P62987 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.2□□□□□ -0.14
UBA52P62987 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.2□□□□□ -0.14
UBA52P62987 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 AC006557.2-201ENST00000592985 1240 ntBASIC14.2□□□□□ -0.14
UBA52P62987 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.2□□□□□ -0.14
UBA52P62987 AC005593.1-201ENST00000624894 515 ntBASIC14.2□□□□□ -0.14
UBA52P62987 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms