Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN12P56749 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN12P56749 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CLDN12P56749 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 IGHV3-47-201ENST00000425060 335 ntBASIC14.3□□□□□ -0.12
CLDN12P56749 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CLDN12P56749 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
CLDN12P56749 ABCD1P5-201ENST00000445663 754 ntBASIC14.3□□□□□ -0.12
CLDN12P56749 BX005266.1-201ENST00000473402 457 ntBASIC14.3□□□□□ -0.12
CLDN12P56749 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.3□□□□□ -0.12
CLDN12P56749 DUX4L26-201ENST00000489078 1255 ntBASIC14.3□□□□□ -0.12
CLDN12P56749 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN12P56749 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN12P56749 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.3□□□□□ -0.12
CLDN12P56749 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.3□□□□□ -0.12
CLDN12P56749 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CLDN12P56749 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.3□□□□□ -0.12
CLDN12P56749 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN12P56749 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CLDN12P56749 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CLDN12P56749 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN12P56749 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CLDN12P56749 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 AC136621.1-201ENST00000624017 2304 ntBASIC14.3□□□□□ -0.12
CLDN12P56749 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN12P56749 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CLDN12P56749 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN12P56749 AC131009.4-201ENST00000624048 1740 ntBASIC14.29□□□□□ -0.12
CLDN12P56749 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN12P56749 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN12P56749 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.29□□□□□ -0.12
CLDN12P56749 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN12P56749 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CLDN12P56749 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLDN12P56749 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN12P56749 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN12P56749 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 LINC00265-3P-201ENST00000447588 903 ntBASIC14.29□□□□□ -0.12
CLDN12P56749 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN12P56749 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN12P56749 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.29□□□□□ -0.12
CLDN12P56749 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN12P56749 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN12P56749 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLDN12P56749 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN12P56749 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN12P56749 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLDN12P56749 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN12P56749 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN12P56749 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLDN12P56749 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN12P56749 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLDN12P56749 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN12P56749 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN12P56749 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN12P56749 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN12P56749 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN12P56749 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLDN12P56749 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDN12P56749 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLDN12P56749 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms