Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SUMO3P55854 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.8□□□□□ -0.04
SUMO3P55854 AC009093.7-201ENST00000623853 1223 ntBASIC14.8□□□□□ -0.04
SUMO3P55854 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.8□□□□□ -0.04
SUMO3P55854 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.8□□□□□ -0.04
SUMO3P55854 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
SUMO3P55854 AC092364.2-201ENST00000596710 2692 ntBASIC14.8□□□□□ -0.04
SUMO3P55854 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.8□□□□□ -0.04
SUMO3P55854 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.8□□□□□ -0.04
SUMO3P55854 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.8□□□□□ -0.04
SUMO3P55854 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.8□□□□□ -0.04
SUMO3P55854 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.8□□□□□ -0.04
SUMO3P55854 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.8□□□□□ -0.04
SUMO3P55854 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.8□□□□□ -0.04
SUMO3P55854 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SUMO3P55854 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SUMO3P55854 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.79□□□□□ -0.04
SUMO3P55854 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.79□□□□□ -0.04
SUMO3P55854 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.79□□□□□ -0.04
SUMO3P55854 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SUMO3P55854 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SUMO3P55854 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.79□□□□□ -0.04
SUMO3P55854 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.79□□□□□ -0.04
SUMO3P55854 CNN2P11-201ENST00000429351 262 ntBASIC14.79□□□□□ -0.04
SUMO3P55854 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.79□□□□□ -0.04
SUMO3P55854 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.79□□□□□ -0.04
SUMO3P55854 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.79□□□□□ -0.04
SUMO3P55854 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SUMO3P55854 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.79□□□□□ -0.04
SUMO3P55854 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.79□□□□□ -0.04
SUMO3P55854 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
SUMO3P55854 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.79□□□□□ -0.04
SUMO3P55854 SNHG9-202ENST00000564014 471 ntBASIC14.79□□□□□ -0.04
SUMO3P55854 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SUMO3P55854 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.79□□□□□ -0.04
SUMO3P55854 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.79□□□□□ -0.04
SUMO3P55854 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SUMO3P55854 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.79□□□□□ -0.04
SUMO3P55854 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SUMO3P55854 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.78□□□□□ -0.04
SUMO3P55854 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.78□□□□□ -0.04
SUMO3P55854 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.78□□□□□ -0.04
SUMO3P55854 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SUMO3P55854 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
SUMO3P55854 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SUMO3P55854 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.78□□□□□ -0.04
SUMO3P55854 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SUMO3P55854 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SUMO3P55854 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.78□□□□□ -0.04
SUMO3P55854 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.78□□□□□ -0.04
SUMO3P55854 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SUMO3P55854 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SUMO3P55854 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SUMO3P55854 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SUMO3P55854 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SUMO3P55854 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SUMO3P55854 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.78□□□□□ -0.04
SUMO3P55854 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SUMO3P55854 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.78□□□□□ -0.04
SUMO3P55854 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SUMO3P55854 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SUMO3P55854 RARRES2P9-201ENST00000565168 469 ntBASIC14.78□□□□□ -0.04
SUMO3P55854 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SUMO3P55854 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.78□□□□□ -0.04
SUMO3P55854 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.78□□□□□ -0.04
SUMO3P55854 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SUMO3P55854 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SUMO3P55854 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.78□□□□□ -0.04
SUMO3P55854 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SUMO3P55854 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.78□□□□□ -0.04
SUMO3P55854 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SUMO3P55854 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SUMO3P55854 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms