Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF140P52738 AC061975.2-201ENST00000581722 295 ntBASIC16.26■□□□□ 0.19
ZNF140P52738 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF140P52738 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ZNF140P52738 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 AL365203.3-201ENST00000609742 2057 ntBASIC16.26■□□□□ 0.19
ZNF140P52738 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ZNF140P52738 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ZNF140P52738 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF140P52738 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF140P52738 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ZNF140P52738 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF140P52738 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ZNF140P52738 CDC14C-201ENST00000428251 1719 ntBASIC16.25■□□□□ 0.19
ZNF140P52738 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
ZNF140P52738 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
ZNF140P52738 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF140P52738 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF140P52738 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
ZNF140P52738 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF140P52738 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
ZNF140P52738 FAM220BP-201ENST00000377689 816 ntBASIC16.25■□□□□ 0.19
ZNF140P52738 AC004461.1-201ENST00000412461 403 ntBASIC16.25■□□□□ 0.19
ZNF140P52738 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.25■□□□□ 0.19
ZNF140P52738 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF140P52738 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.25■□□□□ 0.19
ZNF140P52738 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF140P52738 SLC25A39P2-201ENST00000537614 270 ntBASIC16.25■□□□□ 0.19
ZNF140P52738 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
ZNF140P52738 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.25■□□□□ 0.19
ZNF140P52738 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF140P52738 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
ZNF140P52738 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 LINC02447-202ENST00000501888 2146 ntBASIC16.25■□□□□ 0.19
ZNF140P52738 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ZNF140P52738 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ZNF140P52738 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF140P52738 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF140P52738 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF140P52738 LINC02199-201ENST00000506655 2702 ntBASIC16.25■□□□□ 0.19
ZNF140P52738 UXT-AS1-201ENST00000590504 1525 ntBASIC16.24■□□□□ 0.19
ZNF140P52738 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF140P52738 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF140P52738 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF140P52738 AC022188.1-201ENST00000620960 1664 ntBASIC16.24■□□□□ 0.19
ZNF140P52738 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF140P52738 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ZNF140P52738 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ZNF140P52738 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
ZNF140P52738 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF140P52738 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF140P52738 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF140P52738 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF140P52738 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF140P52738 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ZNF140P52738 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF140P52738 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF140P52738 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
ZNF140P52738 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF140P52738 AP000344.2-201ENST00000512987 629 ntBASIC16.24■□□□□ 0.19
ZNF140P52738 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.24■□□□□ 0.19
ZNF140P52738 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.24■□□□□ 0.19
ZNF140P52738 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF140P52738 AC093520.2-201ENST00000561830 333 ntBASIC16.24■□□□□ 0.19
ZNF140P52738 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.24■□□□□ 0.19
ZNF140P52738 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.24■□□□□ 0.19
ZNF140P52738 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF140P52738 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF140P52738 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms