Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB28P51157 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.78■□□□□ 0.12
RAB28P51157 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
RAB28P51157 AC018529.1-201ENST00000613063 361 ntBASIC15.78■□□□□ 0.12
RAB28P51157 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.78■□□□□ 0.12
RAB28P51157 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
RAB28P51157 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB28P51157 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.78■□□□□ 0.12
RAB28P51157 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB28P51157 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB28P51157 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB28P51157 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAB28P51157 AC006449.6-201ENST00000612330 2296 ntBASIC15.78■□□□□ 0.12
RAB28P51157 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RAB28P51157 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.78■□□□□ 0.12
RAB28P51157 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
RAB28P51157 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB28P51157 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB28P51157 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB28P51157 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAB28P51157 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.77■□□□□ 0.12
RAB28P51157 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB28P51157 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB28P51157 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RAB28P51157 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RAB28P51157 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB28P51157 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB28P51157 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.77■□□□□ 0.12
RAB28P51157 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB28P51157 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.77■□□□□ 0.12
RAB28P51157 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB28P51157 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAB28P51157 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB28P51157 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB28P51157 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
RAB28P51157 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB28P51157 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.77■□□□□ 0.12
RAB28P51157 CNN2P2-201ENST00000443536 909 ntBASIC15.77■□□□□ 0.12
RAB28P51157 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.77■□□□□ 0.12
RAB28P51157 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.77■□□□□ 0.12
RAB28P51157 CNN2P3-201ENST00000450201 906 ntBASIC15.77■□□□□ 0.12
RAB28P51157 AC069262.1-201ENST00000539058 672 ntBASIC15.77■□□□□ 0.12
RAB28P51157 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.77■□□□□ 0.12
RAB28P51157 AC061975.2-201ENST00000581722 295 ntBASIC15.77■□□□□ 0.12
RAB28P51157 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB28P51157 MIR4321-201ENST00000592276 80 ntBASIC15.77■□□□□ 0.12
RAB28P51157 MIR6080-201ENST00000617359 66 ntBASIC15.77■□□□□ 0.12
RAB28P51157 AL136317.3-201ENST00000618497 906 ntBASIC15.77■□□□□ 0.12
RAB28P51157 AC093028.1-201ENST00000622998 982 ntBASIC15.77■□□□□ 0.12
RAB28P51157 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.77■□□□□ 0.12
RAB28P51157 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB28P51157 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB28P51157 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAB28P51157 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.77■□□□□ 0.11
RAB28P51157 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB28P51157 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.77■□□□□ 0.11
RAB28P51157 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB28P51157 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.77■□□□□ 0.11
RAB28P51157 AC092364.2-201ENST00000596710 2692 ntBASIC15.77■□□□□ 0.11
RAB28P51157 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.77■□□□□ 0.11
RAB28P51157 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.77■□□□□ 0.11
RAB28P51157 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAB28P51157 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.77■□□□□ 0.11
RAB28P51157 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB28P51157 AL662844.4-201ENST00000606367 2838 ntBASIC15.76■□□□□ 0.11
RAB28P51157 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB28P51157 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB28P51157 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB28P51157 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RAB28P51157 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB28P51157 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB28P51157 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB28P51157 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB28P51157 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB28P51157 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB28P51157 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.76■□□□□ 0.11
RAB28P51157 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB28P51157 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB28P51157 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RAB28P51157 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB28P51157 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB28P51157 AL353705.2-201ENST00000428243 662 ntBASIC15.76■□□□□ 0.11
RAB28P51157 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB28P51157 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB28P51157 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.76■□□□□ 0.11
RAB28P51157 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.76■□□□□ 0.11
RAB28P51157 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.76■□□□□ 0.11
RAB28P51157 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.76■□□□□ 0.11
RAB28P51157 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.76■□□□□ 0.11
RAB28P51157 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB28P51157 AC015911.4-201ENST00000588022 1070 ntBASIC15.76■□□□□ 0.11
RAB28P51157 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB28P51157 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB28P51157 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RAB28P51157 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB28P51157 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB28P51157 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB28P51157 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB28P51157 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
RAB28P51157 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms