Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.93□□□□□ -0.02
CENPAP49450 KRT18P56-201ENST00000507275 550 ntBASIC14.93□□□□□ -0.02
CENPAP49450 AC073648.2-201ENST00000510116 352 ntBASIC14.93□□□□□ -0.02
CENPAP49450 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.93□□□□□ -0.02
CENPAP49450 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.93□□□□□ -0.02
CENPAP49450 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.93□□□□□ -0.02
CENPAP49450 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.93□□□□□ -0.02
CENPAP49450 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.93□□□□□ -0.02
CENPAP49450 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 AC022188.1-201ENST00000620960 1664 ntBASIC14.93□□□□□ -0.02
CENPAP49450 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
CENPAP49450 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.93□□□□□ -0.02
CENPAP49450 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.93□□□□□ -0.02
CENPAP49450 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CENPAP49450 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.92□□□□□ -0.02
CENPAP49450 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CENPAP49450 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 KRT8P39-201ENST00000396270 1433 ntBASIC14.92□□□□□ -0.02
CENPAP49450 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.92□□□□□ -0.02
CENPAP49450 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.92□□□□□ -0.02
CENPAP49450 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.92□□□□□ -0.02
CENPAP49450 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.92□□□□□ -0.02
CENPAP49450 LAGE3P1-201ENST00000425356 484 ntBASIC14.92□□□□□ -0.02
CENPAP49450 RPS2P1-201ENST00000434010 821 ntBASIC14.92□□□□□ -0.02
CENPAP49450 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.92□□□□□ -0.02
CENPAP49450 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CENPAP49450 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.92□□□□□ -0.02
CENPAP49450 OR7E14P-202ENST00000530490 1290 ntBASIC14.92□□□□□ -0.02
CENPAP49450 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.92□□□□□ -0.02
CENPAP49450 MPDU1-223ENST00000582151 728 ntBASIC14.92□□□□□ -0.02
CENPAP49450 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CENPAP49450 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.92□□□□□ -0.02
CENPAP49450 AC025062.2-201ENST00000605477 670 ntBASIC14.92□□□□□ -0.02
CENPAP49450 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.92□□□□□ -0.02
CENPAP49450 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.92□□□□□ -0.02
CENPAP49450 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.92□□□□□ -0.02
CENPAP49450 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CENPAP49450 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.92□□□□□ -0.02
CENPAP49450 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.92□□□□□ -0.02
CENPAP49450 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.92□□□□□ -0.02
CENPAP49450 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CENPAP49450 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 AL671710.1-201ENST00000610245 2349 ntBASIC14.92□□□□□ -0.02
CENPAP49450 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.92□□□□□ -0.02
CENPAP49450 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CENPAP49450 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.91□□□□□ -0.02
CENPAP49450 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.91□□□□□ -0.02
CENPAP49450 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CENPAP49450 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.91□□□□□ -0.02
CENPAP49450 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.91□□□□□ -0.02
CENPAP49450 GGT3P-204ENST00000453783 1664 ntBASIC14.91□□□□□ -0.02
CENPAP49450 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.91□□□□□ -0.02
CENPAP49450 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.91□□□□□ -0.02
CENPAP49450 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CENPAP49450 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.91□□□□□ -0.02
CENPAP49450 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.91□□□□□ -0.02
CENPAP49450 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.91□□□□□ -0.02
CENPAP49450 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.91□□□□□ -0.02
CENPAP49450 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms