Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.56■□□□□ 0.08
PTPN6P29350 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.56■□□□□ 0.08
PTPN6P29350 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.56■□□□□ 0.08
PTPN6P29350 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.56■□□□□ 0.08
PTPN6P29350 ACTL9-202ENST00000612068 1252 ntBASIC15.56■□□□□ 0.08
PTPN6P29350 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.56■□□□□ 0.08
PTPN6P29350 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.56■□□□□ 0.08
PTPN6P29350 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
PTPN6P29350 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.56■□□□□ 0.08
PTPN6P29350 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN6P29350 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN6P29350 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PTPN6P29350 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PTPN6P29350 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN6P29350 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PTPN6P29350 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
PTPN6P29350 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN6P29350 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN6P29350 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN6P29350 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN6P29350 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PTPN6P29350 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN6P29350 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN6P29350 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN6P29350 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
PTPN6P29350 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN6P29350 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PTPN6P29350 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PTPN6P29350 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN6P29350 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PTPN6P29350 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN6P29350 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN6P29350 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PTPN6P29350 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN6P29350 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN6P29350 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN6P29350 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.54■□□□□ 0.08
PTPN6P29350 AC005622.1-201ENST00000636801 1703 ntBASIC15.54■□□□□ 0.08
PTPN6P29350 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.54■□□□□ 0.08
PTPN6P29350 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
PTPN6P29350 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PTPN6P29350 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN6P29350 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.54■□□□□ 0.08
PTPN6P29350 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PTPN6P29350 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN6P29350 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PTPN6P29350 MIR648-201ENST00000385046 94 ntBASIC15.54■□□□□ 0.08
PTPN6P29350 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PTPN6P29350 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN6P29350 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
PTPN6P29350 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN6P29350 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.54■□□□□ 0.08
PTPN6P29350 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
PTPN6P29350 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.54■□□□□ 0.08
PTPN6P29350 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PTPN6P29350 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PTPN6P29350 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.54■□□□□ 0.08
PTPN6P29350 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.54■□□□□ 0.08
PTPN6P29350 AC016027.1-202ENST00000607927 1699 ntBASIC15.54■□□□□ 0.08
PTPN6P29350 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.54■□□□□ 0.08
PTPN6P29350 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN6P29350 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PTPN6P29350 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.53■□□□□ 0.08
PTPN6P29350 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.53■□□□□ 0.08
PTPN6P29350 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN6P29350 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN6P29350 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.53■□□□□ 0.08
PTPN6P29350 AC012569.1-201ENST00000591191 1524 ntBASIC15.53■□□□□ 0.08
PTPN6P29350 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.53■□□□□ 0.08
PTPN6P29350 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms