Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.83□□□□□ -0.2
COL8A2P25067 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.83□□□□□ -0.2
COL8A2P25067 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
COL8A2P25067 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 HLA-H-201ENST00000383620 1096 ntBASIC13.83□□□□□ -0.2
COL8A2P25067 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
COL8A2P25067 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.83□□□□□ -0.2
COL8A2P25067 BASP1P1-201ENST00000430708 665 ntBASIC13.83□□□□□ -0.2
COL8A2P25067 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.83□□□□□ -0.2
COL8A2P25067 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.83□□□□□ -0.2
COL8A2P25067 INGX-202ENST00000489074 768 ntBASIC13.83□□□□□ -0.2
COL8A2P25067 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.83□□□□□ -0.2
COL8A2P25067 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.83□□□□□ -0.2
COL8A2P25067 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.83□□□□□ -0.2
COL8A2P25067 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.83□□□□□ -0.2
COL8A2P25067 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.83□□□□□ -0.2
COL8A2P25067 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.83□□□□□ -0.2
COL8A2P25067 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.83□□□□□ -0.2
COL8A2P25067 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.83□□□□□ -0.2
COL8A2P25067 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
COL8A2P25067 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 GGT4P-201ENST00000623672 1708 ntBASIC13.83□□□□□ -0.2
COL8A2P25067 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
COL8A2P25067 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.83□□□□□ -0.2
COL8A2P25067 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.83□□□□□ -0.2
COL8A2P25067 AC078925.2-201ENST00000624013 1973 ntBASIC13.83□□□□□ -0.2
COL8A2P25067 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.83□□□□□ -0.2
COL8A2P25067 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
COL8A2P25067 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
COL8A2P25067 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL8A2P25067 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.83□□□□□ -0.2
COL8A2P25067 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
COL8A2P25067 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.82□□□□□ -0.2
COL8A2P25067 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
COL8A2P25067 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.82□□□□□ -0.2
COL8A2P25067 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
COL8A2P25067 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.82□□□□□ -0.2
COL8A2P25067 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.82□□□□□ -0.2
COL8A2P25067 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.82□□□□□ -0.2
COL8A2P25067 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.82□□□□□ -0.2
COL8A2P25067 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.82□□□□□ -0.2
COL8A2P25067 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
COL8A2P25067 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 FAM220BP-201ENST00000377689 816 ntBASIC13.82□□□□□ -0.2
COL8A2P25067 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.82□□□□□ -0.2
COL8A2P25067 RNA5SP410-201ENST00000516285 106 ntBASIC13.82□□□□□ -0.2
COL8A2P25067 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.82□□□□□ -0.2
COL8A2P25067 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.82□□□□□ -0.2
COL8A2P25067 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.82□□□□□ -0.2
COL8A2P25067 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
COL8A2P25067 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
COL8A2P25067 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
COL8A2P25067 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
COL8A2P25067 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.82□□□□□ -0.2
COL8A2P25067 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL8A2P25067 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
COL8A2P25067 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
COL8A2P25067 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms