Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCND1P24385 RPS2P1-201ENST00000434010 821 ntBASIC16.56■□□□□ 0.24
CCND1P24385 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.56■□□□□ 0.24
CCND1P24385 AC079781.3-201ENST00000449110 356 ntBASIC16.56■□□□□ 0.24
CCND1P24385 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCND1P24385 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.56■□□□□ 0.24
CCND1P24385 AL160237.2-201ENST00000556165 472 ntBASIC16.56■□□□□ 0.24
CCND1P24385 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.56■□□□□ 0.24
CCND1P24385 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.56■□□□□ 0.24
CCND1P24385 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.56■□□□□ 0.24
CCND1P24385 AL031008.1-201ENST00000619963 541 ntBASIC16.56■□□□□ 0.24
CCND1P24385 MIR1199-201ENST00000621445 119 ntBASIC16.56■□□□□ 0.24
CCND1P24385 AC008735.5-201ENST00000623544 497 ntBASIC16.56■□□□□ 0.24
CCND1P24385 AL805961.1-202ENST00000641562 540 ntBASIC16.56■□□□□ 0.24
CCND1P24385 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.56■□□□□ 0.24
CCND1P24385 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCND1P24385 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCND1P24385 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCND1P24385 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCND1P24385 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCND1P24385 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCND1P24385 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCND1P24385 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCND1P24385 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCND1P24385 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.56■□□□□ 0.24
CCND1P24385 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCND1P24385 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCND1P24385 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCND1P24385 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCND1P24385 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.56■□□□□ 0.24
CCND1P24385 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCND1P24385 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.55■□□□□ 0.24
CCND1P24385 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.55■□□□□ 0.24
CCND1P24385 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.55■□□□□ 0.24
CCND1P24385 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 AL021920.2-201ENST00000624828 1351 ntBASIC16.55■□□□□ 0.24
CCND1P24385 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 AP002414.2-201ENST00000591780 3365 ntBASIC16.55■□□□□ 0.24
CCND1P24385 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CCND1P24385 KRT18P27-201ENST00000427733 1299 ntBASIC16.55■□□□□ 0.24
CCND1P24385 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.55■□□□□ 0.24
CCND1P24385 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.55■□□□□ 0.24
CCND1P24385 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.55■□□□□ 0.24
CCND1P24385 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.55■□□□□ 0.24
CCND1P24385 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCND1P24385 AL773604.1-201ENST00000617417 272 ntBASIC16.55■□□□□ 0.24
CCND1P24385 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CCND1P24385 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.55■□□□□ 0.24
CCND1P24385 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.55■□□□□ 0.24
CCND1P24385 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.55■□□□□ 0.24
CCND1P24385 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.55■□□□□ 0.24
CCND1P24385 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCND1P24385 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCND1P24385 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCND1P24385 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCND1P24385 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.54■□□□□ 0.24
CCND1P24385 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCND1P24385 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CCND1P24385 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCND1P24385 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.54■□□□□ 0.24
CCND1P24385 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCND1P24385 AC243591.1-201ENST00000452967 1364 ntBASIC16.54■□□□□ 0.24
CCND1P24385 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.54■□□□□ 0.24
CCND1P24385 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCND1P24385 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCND1P24385 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.54■□□□□ 0.24
CCND1P24385 AC136632.2-201ENST00000512891 861 ntBASIC16.54■□□□□ 0.24
CCND1P24385 AP002490.2-201ENST00000524791 560 ntBASIC16.54■□□□□ 0.24
CCND1P24385 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.54■□□□□ 0.24
CCND1P24385 AP002469.2-201ENST00000531724 424 ntBASIC16.54■□□□□ 0.24
CCND1P24385 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.54■□□□□ 0.24
CCND1P24385 AL662844.1-201ENST00000546340 181 ntBASIC16.54■□□□□ 0.24
CCND1P24385 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.54■□□□□ 0.24
CCND1P24385 TERC-201ENST00000602385 541 ntBASIC16.54■□□□□ 0.24
CCND1P24385 AC104692.2-201ENST00000603054 253 ntBASIC16.54■□□□□ 0.24
CCND1P24385 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CCND1P24385 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.54■□□□□ 0.24
CCND1P24385 AC068587.6-202ENST00000641839 5619 ntBASIC16.54■□□□□ 0.24
CCND1P24385 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCND1P24385 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCND1P24385 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms