Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 AC041040.2-201ENST00000622926 2899 ntBASIC12.63□□□□□ -0.39
RAB4AP20338 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RAB4AP20338 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 AL135905.2-201ENST00000584934 1404 ntBASIC12.62□□□□□ -0.39
RAB4AP20338 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.62□□□□□ -0.39
RAB4AP20338 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB4AP20338 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
RAB4AP20338 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RAB4AP20338 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
RAB4AP20338 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
RAB4AP20338 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB4AP20338 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB4AP20338 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB4AP20338 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RAB4AP20338 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB4AP20338 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
RAB4AP20338 DMBT1P1-203ENST00000636837 4628 ntBASIC12.62□□□□□ -0.39
RAB4AP20338 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB4AP20338 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RAB4AP20338 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.62□□□□□ -0.39
RAB4AP20338 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.62□□□□□ -0.39
RAB4AP20338 AC024243.1-201ENST00000609234 778 ntBASIC12.62□□□□□ -0.39
RAB4AP20338 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
RAB4AP20338 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB4AP20338 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB4AP20338 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RAB4AP20338 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB4AP20338 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB4AP20338 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB4AP20338 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB4AP20338 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RAB4AP20338 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RAB4AP20338 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
RAB4AP20338 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
RAB4AP20338 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 AC092338.2-201ENST00000568827 1415 ntBASIC12.62□□□□□ -0.39
RAB4AP20338 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB4AP20338 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
RAB4AP20338 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB4AP20338 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RAB4AP20338 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB4AP20338 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB4AP20338 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB4AP20338 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB4AP20338 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RAB4AP20338 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB4AP20338 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.61□□□□□ -0.39
RAB4AP20338 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RAB4AP20338 CCR12P-201ENST00000446203 998 ntBASIC12.61□□□□□ -0.39
RAB4AP20338 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12.61□□□□□ -0.39
RAB4AP20338 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB4AP20338 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB4AP20338 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB4AP20338 MIR3917-201ENST00000580971 93 ntBASIC12.61□□□□□ -0.39
RAB4AP20338 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB4AP20338 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RAB4AP20338 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB4AP20338 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB4AP20338 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RAB4AP20338 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RAB4AP20338 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB4AP20338 AL031595.1-201ENST00000623969 4709 ntBASIC12.61□□□□□ -0.39
RAB4AP20338 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB4AP20338 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB4AP20338 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms