Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.26■□□□□ 0.03
TNFRSF1BP20333 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 AC129492.6-201ENST00000611383 1305 ntBASIC15.25■□□□□ 0.03
TNFRSF1BP20333 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 HCG4-201ENST00000418983 998 ntBASIC15.25■□□□□ 0.03
TNFRSF1BP20333 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 OR7E14P-202ENST00000530490 1290 ntBASIC15.25■□□□□ 0.03
TNFRSF1BP20333 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF1BP20333 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 AC092850.2-201ENST00000623821 2697 ntBASIC15.24■□□□□ 0.03
TNFRSF1BP20333 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 MIR1224-201ENST00000408193 85 ntBASIC15.24■□□□□ 0.03
TNFRSF1BP20333 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 AC136632.2-201ENST00000512891 861 ntBASIC15.24■□□□□ 0.03
TNFRSF1BP20333 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 AC020765.3-201ENST00000613051 740 ntBASIC15.24■□□□□ 0.03
TNFRSF1BP20333 GGTLC5P-201ENST00000617623 998 ntBASIC15.24■□□□□ 0.03
TNFRSF1BP20333 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF1BP20333 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms